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SCNpilot_cont_500_bf_scaffold_13812

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_13812_1
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..479)
DNA (477bp) protein (159aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
tpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW4_MICTS
SCNpilot_cont_500_bf_scaffold_13812_2
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(467..1684)
DNA (1218bp) protein (406aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
pgk; 3-phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW5_MICTS
SCNpilot_cont_500_bf_scaffold_13812_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1694..2704)
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
gap; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367829C rbh
SCNpilot_cont_500_bf_scaffold_13812_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2799..3425)
DNA (627bp) protein (209aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
sodA; hypothetical protein; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] rbh
superoxide dismutase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003693928 rbh
SCNpilot_cont_500_bf_scaffold_13812_5
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3855..4358
DNA (504bp) protein (168aa)
Putative epimerase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQR6_9MICO
Putative epimerase {ECO:0000313|EMBL:GAD35350.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
MFS transporter; K06998
SCNpilot_cont_500_bf_scaffold_13812_6
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4372..4794)
DNA (423bp) protein (141aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Microbacterium sp. TS-1 RepID=U2XK48_9MICO
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein; K09762 hypothetical protein
SCNpilot_cont_500_bf_scaffold_13812_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5290..6174)
DNA (885bp) protein (295aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Microbacterium yannicii RepID=UPI0002E4E940 rbh
Nucleotide-binding protein LK09_13610 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
P-loop-containing kinase; K06958 UPF0042 nucleotide-binding protein
SCNpilot_cont_500_bf_scaffold_13812_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6202..7377)
DNA (1176bp) protein (392aa)
excinuclease ABC subunit C n=1 Tax=Microbacterium yannicii RepID=UPI0002E257AA
uvrC; nuclease subunit of the excinuclease complex; K03703 excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying 8 items

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