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SCNpilot_cont_500_bf_scaffold_25878

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_25878_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..215
DNA (213bp) protein (71aa)
50S ribosomal protein L16 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E517_9MICO
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rplP; ribosomal protein L16/L10E; K02878 large subunit ribosomal protein L16
SCNpilot_cont_500_bf_scaffold_25878_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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215..526
DNA (312bp) protein (104aa)
Ribosomal protein L29 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF26_MICTS
rpmC; ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_25878_3
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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526..822
DNA (297bp) protein (99aa)
30S ribosomal protein S17 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADS2_9MICO
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rpsQ; ribosomal protein S17; K02961 small subunit ribosomal protein S17
SCNpilot_cont_500_bf_scaffold_25878_4
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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855..1223
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF24_MICTS
rplN; ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_cont_500_bf_scaffold_25878_5
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1226..1585
DNA (360bp) protein (120aa)
50S ribosomal protein L24 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF23_MICTS
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
rplX; ribosomal protein L24; K02895 large subunit ribosomal protein L24
SCNpilot_cont_500_bf_scaffold_25878_6
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1585..2175
DNA (591bp) protein (197aa)
50S ribosomal protein L5 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FC017 rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
rplE; ribosomal protein L5; K02931 large subunit ribosomal protein L5
SCNpilot_cont_500_bf_scaffold_25878_7
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2334..2582
DNA (249bp) protein (83aa)
30S ribosomal protein S8 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CAA59
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rpsH; ribosomal protein S8; K02994 small subunit ribosomal protein S8
SCNpilot_cont_500_bf_scaffold_25878_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2589..3125
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Microbacterium yannicii RepID=UPI0002EC5595 rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rplF; ribosomal protein L6P/L9E; K02933 large subunit ribosomal protein L6
SCNpilot_cont_500_bf_scaffold_25878_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3128..3487
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DDCA9
rplR; ribosomal protein L18; K02881 large subunit ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_cont_500_bf_scaffold_25878_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3484..4185
DNA (702bp) protein (234aa)
30S ribosomal protein S5 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF18_MICTS
rpsE; ribosomal protein S5; K02988 small subunit ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_25878_11
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4185..4370
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XPJ0_9MICO
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rpmD; ribosomal protein L30/L7E; K02907 large subunit ribosomal protein L30
SCNpilot_cont_500_bf_scaffold_25878_12
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4593..4982
DNA (390bp) protein (130aa)
50S ribosomal protein L15 n=1 Tax=Leifsonia sp. 109 RepID=UPI000381456E
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_25878_13
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5127..6449
DNA (1323bp) protein (441aa)
preprotein translocase subunit SecY n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6AE13
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
SCNpilot_cont_500_bf_scaffold_25878_14
unknown

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6446..6511
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 14 items

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