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SCNpilot_cont_500_bf_scaffold_4462

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4462_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..668)
DNA (666bp) protein (222aa)
GroES-like protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRG4_LEIAQ
GroES-like protein {ECO:0000313|EMBL:ERK71154.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
NADPH:quinone reductase
SCNpilot_cont_500_bf_scaffold_4462_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(738..2489)
DNA (1752bp) protein (584aa)
Periplasmic binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R7D5_LEIAQ rbh
Periplasmic binding protein {ECO:0000313|EMBL:ERK71155.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Fe3+-siderophore ABC transporter, ATP-binding protein
SCNpilot_cont_500_bf_scaffold_4462_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2486..3496)
DNA (1011bp) protein (337aa)
Ferric enterobactin transport system permease protein FepG family protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SWF5_LEIAQ rbh
Ferric enterobactin transport system permease protein FepG family protein {ECO:0000313|EMBL:ERK69608.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
enterobactin ABC transporter permease; K02015 iron complex transport system permease protein
SCNpilot_cont_500_bf_scaffold_4462_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3493..4545)
DNA (1053bp) protein (351aa)
Ferric enterobactin transport system permease protein FepD domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RFJ4_LEIAQ rbh
Ferric enterobactin transport system permease protein FepD domain protein {ECO:0000313|EMBL:ERK67339.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter permease
SCNpilot_cont_500_bf_scaffold_4462_5
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4650..6413)
DNA (1764bp) protein (588aa)
hypothetical protein n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI000368D874 rbh
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:CCH76850.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
multidrug ABC transporter ATPase/permease rbh
SCNpilot_cont_500_bf_scaffold_4462_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6410..8008)
DNA (1599bp) protein (533aa)
ABC transporter transmembrane region (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SJP2_LEIAQ rbh
ABC transporter transmembrane region {ECO:0000313|EMBL:ERK65688.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
lipid ABC transporter ATPase/inner membrane protein rbh
SCNpilot_cont_500_bf_scaffold_4462_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8113..8862
DNA (750bp) protein (250aa)
Transcriptional regulator, AraC family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RE20_LEIAQ rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERK73495.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4462_8
Austwickia chelonae, Austwickia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8856..9269)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00035D723E
Uncharacterized protein {ECO:0000313|EMBL:GAB76990.1}; TaxID=1184607 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Austwickia.;" source="Austwickia chelonae NBRC 105200.;"
MutT/NUDIX family protein
SCNpilot_cont_500_bf_scaffold_4462_9
unknown

Not on your lists

comp(9344..9589)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4462_10
unknown

Not on your lists

comp(9605..9997)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4462_11
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10033..10572
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036DC27A
Transporter, major facilitator family protein {ECO:0000313|EMBL:EZP27745.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_4462_12
unknown

Not on your lists

10830..11207
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4462_13
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11261..11692)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5Z1V6_MYCSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF35782.1}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
SCNpilot_cont_500_bf_scaffold_4462_trna_2
unknown

Not on your lists

comp(11790..11863)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_4462_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11881..13131)
DNA (1251bp) protein (417aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T4I7_LEIAQ rbh
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ERK72393.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
glucosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_4462_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13223..14173)
DNA (951bp) protein (317aa)
Tat pathway signal sequence domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCH1_LEIAQ rbh
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:ERK72392.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4462_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14229..14795
DNA (567bp) protein (189aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Peptide deformylase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUF1_LEIAQ rbh
polypeptide deformylase
SCNpilot_cont_500_bf_scaffold_4462_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14830..15708)
DNA (879bp) protein (293aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAX2_LEIAQ rbh
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERK72390.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
two-component system sensor protein rbh
SCNpilot_cont_500_bf_scaffold_4462_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15783..16106)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RV20_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72389.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4462_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16229..16891)
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T4I2_LEIAQ rbh
Response regulator receiver domain protein {ECO:0000313|EMBL:ERK72388.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
two component system response regulator
SCNpilot_cont_500_bf_scaffold_4462_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16888..18069)
DNA (1182bp) protein (394aa)
Histidine kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCG5_LEIAQ rbh
Histidine kinase {ECO:0000313|EMBL:ERK72387.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
two component system sensor kinase
SCNpilot_cont_500_bf_scaffold_4462_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18174..18398)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUE5_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72386.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_4462_trna_1
unknown

Not on your lists

comp(18456..18528)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_4462_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18617..18916)
DNA (300bp) protein (100aa)
4-phosphoerythronate dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAW6_LEIAQ
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:ERK72385.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
serA; phosphoglycerate dehydrogenase
SCNpilot_cont_500_bf_scaffold_4462_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18913..19632)
DNA (720bp) protein (240aa)
4-phosphoerythronate dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAW6_LEIAQ rbh
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:ERK72385.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
serA; phosphoglycerate dehydrogenase
SCNpilot_cont_500_bf_scaffold_4462_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19680..20528)
DNA (849bp) protein (283aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RV15_LEIAQ rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK72384.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
oppF; oligopeptide transporter rbh
SCNpilot_cont_500_bf_scaffold_4462_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20538..22226)
DNA (1689bp) protein (563aa)
Putative phosphonate C-P lyase system protein PhnK n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T4H5_LEIAQ rbh
Putative phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:ERK72383.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter ATP-binding protein
SCNpilot_cont_500_bf_scaffold_4462_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22223..22771)
DNA (549bp) protein (183aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCG0_LEIAQ
ABC transporter, permease protein {ECO:0000313|EMBL:ERK72382.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter permease
Displaying 28 items

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