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SCNpilot_cont_500_bf_scaffold_4490

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4490_1
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2..421
DNA (420bp) protein (140aa)
NADH:ubiquinone oxidoreductase subunit 6 (chain J) n=1 Tax=Humibacter albus RepID=UPI0003B4E218
Putative NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Precursor) {ECO:0000313|EMBL:ELS58513.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
SCNpilot_cont_500_bf_scaffold_4490_2
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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418..723
DNA (306bp) protein (102aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
NADH-ubiquinone oxidoreductase subunit 4L; K05576 NAD(P)H-quinone oxidoreductase subunit 4L [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase n=1 Tax=Humibacter albus RepID=UPI0003B3F09E
SCNpilot_cont_500_bf_scaffold_4490_3
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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730..2592
DNA (1863bp) protein (621aa)
NADH dehydrogenase n=1 Tax=Humibacter albus RepID=UPI0003B3CCF7 rbh
NADH dehydrogenase {ECO:0000313|EMBL:KIH96634.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
proton-translocating NADH-quinone oxidoreductase subunit L rbh
SCNpilot_cont_500_bf_scaffold_4490_4
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2589..4127
DNA (1539bp) protein (513aa)
proton-translocating NADH-quinone oxidoreductase, chain M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
oxidoreductase n=1 Tax=Humibacter albus RepID=UPI0003B69B31 rbh
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:AIG80414.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
SCNpilot_cont_500_bf_scaffold_4490_5
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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4124..5563
DNA (1440bp) protein (480aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
nuoN; NADH-quinone oxidoreductase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit N n=1 Tax=Humibacter albus RepID=UPI0003B67B61 rbh
SCNpilot_cont_500_bf_scaffold_4490_6
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5670..6569
DNA (900bp) protein (300aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13) rbh
Fructose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:AFN46179.1}; EC=4.1.2.13 {ECO:0000313|EMBL:AFN46179.1};; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
Fructose-1,6-bisphosphate aldolase n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6X3J4_PROPF rbh
SCNpilot_cont_500_bf_scaffold_4490_7
unknown

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6569..6754
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4490_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6698..7408)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RDG4_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73295.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_4490_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8539..9252
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6X2_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK73233.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4490_10
unknown

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9348..9830
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4490_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10076..11845
DNA (1770bp) protein (590aa)
BNR/Asp-box repeat protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RD76_LEIAQ rbh
BNR/Asp-box repeat protein {ECO:0000313|EMBL:ERK73210.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
BNR repeat-containing glycosyl hydrolase
SCNpilot_cont_500_bf_scaffold_4490_12
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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11842..13143
DNA (1302bp) protein (434aa)
peptidase M23 n=1 Tax=Glaciibacter superstes RepID=UPI0003B3B853 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC65297.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
cell wall binding protein
SCNpilot_cont_500_bf_scaffold_4490_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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13136..13768
DNA (633bp) protein (211aa)
Redoxin family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6V4_LEIAQ rbh
Redoxin family protein {ECO:0000313|EMBL:ERK73213.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
thiol:disulfide interchange protein
SCNpilot_cont_500_bf_scaffold_4490_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13826..14794
DNA (969bp) protein (323aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RXG4_LEIAQ rbh
prolipoprotein diacylglyceryl transferase rbh
SCNpilot_cont_500_bf_scaffold_4490_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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14787..15026
DNA (240bp) protein (80aa)
ResB-like protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RD81_LEIAQ
ResB-like protein {ECO:0000313|EMBL:ERK73215.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
cytochrome C biosynthesis associated protein
Displaying 15 items

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