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SCNpilot_cont_500_bf_scaffold_5225

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5225_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..542)
DNA (540bp) protein (180aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RX56_LEIAQ rbh
peptidyl-prolyl cis-trans isomerase rbh
SCNpilot_cont_500_bf_scaffold_5225_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

668..1222
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCY4_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK73105.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5225_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1324..1524
DNA (201bp) protein (67aa)
PspC domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWG9_LEIAQ
PspC domain protein {ECO:0000313|EMBL:ERK73106.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5225_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1549..1965)
DNA (417bp) protein (139aa)
Hydrolase, NUDIX family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEJ7_LEIAQ
Hydrolase, NUDIX family {ECO:0000313|EMBL:ERK73107.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
MutT-like domain-containing protein
SCNpilot_cont_500_bf_scaffold_5225_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2010..2876
DNA (867bp) protein (289aa)
mutM; formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] rbh
Putative DNA-formamidopyrimidine glycosylase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6L1_LEIAQ rbh
Putative DNA-formamidopyrimidine glycosylase {ECO:0000313|EMBL:ERK73108.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_5225_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2892..3323)
DNA (432bp) protein (144aa)
Rhodanese-like protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RX62_LEIAQ
Rhodanese-like protein {ECO:0000313|EMBL:ERK73109.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rhodanese-related sulfurtransferase
SCNpilot_cont_500_bf_scaffold_5225_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3417..3890
DNA (474bp) protein (158aa)
Transcriptional regulator, AsnC family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCZ0_LEIAQ
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ERK73110.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
SCNpilot_cont_500_bf_scaffold_5225_trna_2
unknown

Not on your lists

comp(3881..3953)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_5225_trna_1
unknown

Not on your lists

comp(3968..4041)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_5225_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4056..4481)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWH3_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73111.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5225_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4471..7074)
DNA (2604bp) protein (868aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] rbh
DNA gyrase subunit A n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEK2_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_5225_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7064..9085)
DNA (2022bp) protein (674aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
DNA gyrase subunit B n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6L5_LEIAQ rbh
DNA gyrase subunit B rbh
SCNpilot_cont_500_bf_scaffold_5225_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9209..9700)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RX67_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK73114.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5225_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9693..10859)
DNA (1167bp) protein (389aa)
DNA replication and repair protein RecF n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCZ3_LEIAQ rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
recombination protein F
SCNpilot_cont_500_bf_scaffold_5225_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10874..11551)
DNA (678bp) protein (226aa)
Phosphogluconate dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWI0_LEIAQ
Phosphogluconate dehydrogenase {ECO:0000313|EMBL:ERK73116.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
6-phosphogluconate dehydrogenase
SCNpilot_cont_500_bf_scaffold_5225_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11697..12842)
DNA (1146bp) protein (382aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
DNA polymerase III subunit beta n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEK6_LEIAQ rbh
DNA polymerase III subunit beta rbh
SCNpilot_cont_500_bf_scaffold_5225_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13269..13439)
DNA (171bp) protein (57aa)
chromosomal replication initiation protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003645AF6
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein
Displaying 17 items

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