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SCNpilot_cont_500_bf_scaffold_5250

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5250_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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23..505
DNA (483bp) protein (161aa)
CarD-like protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6M6_LEIAQ rbh
CarD-like protein {ECO:0000313|EMBL:ERK70367.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transcriptional regulator, CarD-like regulator; K07736 CarD family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_5250_2
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

656..1294
DNA (639bp) protein (213aa)
NAD-dependent epimerase n=1 Tax=Micrococcus luteus RepID=UPI0002DA0CFC
Uncharacterized protein {ECO:0000313|EMBL:EFD50607.1}; TaxID=596312 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus SK58.;"
NADH-flavin reductase; K07118
SCNpilot_cont_500_bf_scaffold_5250_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1362..2504
DNA (1143bp) protein (381aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCQ1_LEIAQ rbh
Bifunctional enzyme IspD/IspF {ECO:0000256|SAAS:SAAS00096235}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase rbh
SCNpilot_cont_500_bf_scaffold_5250_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2539..3972
DNA (1434bp) protein (478aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Cysteine--tRNA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2QTR9_LEIAQ rbh
cysteinyl-tRNA synthetase rbh
SCNpilot_cont_500_bf_scaffold_5250_5
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3969..4982
DNA (1014bp) protein (338aa)
tRNA/rRNA methyltransferase protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PBG3_LEIXC rbh
tRNA/rRNA methyltransferase protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40833.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_5250_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5077..6381)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQP9_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70909.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5250_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6488..7342)
DNA (855bp) protein (285aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T088_LEIAQ
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK70908.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
glycerol-phosphate porter
SCNpilot_cont_500_bf_scaffold_5250_8
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7306..7545)
DNA (240bp) protein (80aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T088_LEIAQ
palK; glycerol-phosphate porter; K10243 cellobiose transport system ATP-binding protein
Glycerol-phosphate porter {ECO:0000313|EMBL:AAT89559.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_500_bf_scaffold_5250_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7846..8745
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T883_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70907.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5250_trna_1
unknown

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8806..8878
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_5250_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9018..10919
DNA (1902bp) protein (634aa)
FAD binding domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPZ7_LEIAQ rbh
FAD binding domain protein {ECO:0000313|EMBL:ERK70906.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
flavoprotein monooxygenase rbh
SCNpilot_cont_500_bf_scaffold_5250_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10995..11171
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R6P1_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70905.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_5250_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11138..11965)
DNA (828bp) protein (276aa)
Cellulose binding domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQP4_LEIAQ
Cellulose binding domain protein {ECO:0000313|EMBL:ERK70904.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
carbohydrate binding domain protein
SCNpilot_cont_500_bf_scaffold_5250_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11962..13077)
DNA (1116bp) protein (372aa)
Cellulose binding domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQP4_LEIAQ rbh
Cellulose binding domain protein {ECO:0000313|EMBL:ERK70904.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
bglC; endoglucanase CelA
SCNpilot_cont_500_bf_scaffold_5250_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13164..13760
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T082_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70903.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5250_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13770..13892)
DNA (123bp) protein (41aa)
Transcriptional regulator, GntR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T877_LEIAQ
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERK70902.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
GntR family transcriptional regulator
Displaying 16 items

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