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SCNpilot_cont_500_bf_scaffold_5723

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5723_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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3..266
DNA (264bp) protein (88aa)
ATPase AAA n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003B4C41A
AAA ATPase
AAA ATPase central domain protein {ECO:0000313|EMBL:ADP82276.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_5723_2
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

311..1408
DNA (1098bp) protein (366aa)
Tetratricopeptide repeat protein, putative n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FH51_MYCSM
hypothetical protein
Tetratricopeptide repeat protein, putative {ECO:0000313|EMBL:ELQ90750.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
SCNpilot_cont_500_bf_scaffold_5723_3
unknown

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comp(1386..1502)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5723_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1556..2104)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5A4_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK69892.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
acetyltransferase
SCNpilot_cont_500_bf_scaffold_5723_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2180..3100)
DNA (921bp) protein (307aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Protoheme IX farnesyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SXA6_LEIAQ rbh
protoheme IX farnesyltransferase rbh
SCNpilot_cont_500_bf_scaffold_5723_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3415..4263)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y149_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJL43250.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_500_bf_scaffold_5723_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4661..5479
DNA (819bp) protein (273aa)
tktA1; transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1]
Transketolase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMV0_LEIAQ
Transketolase {ECO:0000313|EMBL:ERK69894.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_5723_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5507..6619
DNA (1113bp) protein (371aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
tal2; transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] rbh
Transaldolase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R3R2_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_5723_9
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6616..8226
DNA (1611bp) protein (537aa)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780};; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
glucose-6-phosphate isomerase n=1 Tax=Leifsonia sp. 109 RepID=UPI00037B3D41 rbh
glucose-6-phosphate isomerase rbh
SCNpilot_cont_500_bf_scaffold_5723_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8259..9197
DNA (939bp) protein (313aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCI3_LEIAQ
SCNpilot_cont_500_bf_scaffold_5723_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9194..9739
DNA (546bp) protein (182aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCI3_LEIAQ
glucose-6-phosphate 1-dehydrogenase
SCNpilot_cont_500_bf_scaffold_5723_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9736..10698
DNA (963bp) protein (321aa)
Putative opcA protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW18_LEIAQ rbh
Putative opcA protein {ECO:0000313|EMBL:ERK72941.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
oxppcycle protein rbh
SCNpilot_cont_500_bf_scaffold_5723_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10695..11465
DNA (771bp) protein (257aa)
6-phosphogluconolactonase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TE38_LEIAQ rbh
6-phosphogluconolactonase {ECO:0000313|EMBL:ERK72942.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
6-phosphogluconolactonase rbh
SCNpilot_cont_500_bf_scaffold_5723_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11612..11977)
DNA (366bp) protein (122aa)
RNA polymerase-binding protein RbpA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T669_LEIAQ
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
electron transport protein
SCNpilot_cont_500_bf_scaffold_5723_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12004..12249)
DNA (246bp) protein (82aa)
Preprotein translocase, SecG subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWR0_LEIAQ
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ERK72944.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
SCNpilot_cont_500_bf_scaffold_5723_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12340..13143)
DNA (804bp) protein (268aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Triosephosphate isomerase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCJ3_LEIAQ rbh
triosephosphate isomerase rbh
SCNpilot_cont_500_bf_scaffold_5723_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13131..14348)
DNA (1218bp) protein (406aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Phosphoglycerate kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW32_LEIAQ rbh
phosphoglycerate kinase rbh
SCNpilot_cont_500_bf_scaffold_5723_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14364..15368)
DNA (1005bp) protein (335aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
gapA; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] rbh
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TE52_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_5723_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15471..15623)
DNA (153bp) protein (51aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sodA; superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T682_LEIAQ
Displaying 19 items

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