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SCNpilot_cont_500_bf_scaffold_2035

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2035_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..763
DNA (762bp) protein (254aa)
ABC transporter, solute-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SUL7_LEIAQ rbh
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERK66217.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
malE; maltose/trehalose porter; K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2035_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

768..1745
DNA (978bp) protein (326aa)
ABC transporter, permease protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3A1_LEIAQ rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK69212.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
palF; ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2035_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1742..2569
DNA (828bp) protein (276aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SV73_LEIAQ rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK69213.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
palG; ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2035_4
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2580..4097
DNA (1518bp) protein (506aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
Glucosyltransferase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PFS8_LEIXC rbh
glucosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_2035_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4094..5314
DNA (1221bp) protein (407aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|SAAS:SAAS00085888};; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Anhydro-N-acetylmuramic acid kinase (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2QYU1_LEIAQ rbh
aspartyl/glutamyl-tRNA amidotransferase subunit B rbh
SCNpilot_cont_500_bf_scaffold_2035_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5341..6321
DNA (981bp) protein (327aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifso
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMX9_LEIAQ rbh
murQ; N-acetylmuramic acid 6-phosphate etherase rbh
SCNpilot_cont_500_bf_scaffold_2035_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6311..7198
DNA (888bp) protein (296aa)
SIS domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SXD8_LEIAQ rbh
SIS domain protein {ECO:0000313|EMBL:ERK69918.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
RpiR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2035_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7195..8901
DNA (1707bp) protein (569aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K12373 hexosaminidase [EC:3.2.1.52]
Glycosyl hydrolase family 20, catalytic domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SUL1_LEIAQ rbh
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:ERK66212.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_2035_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8993..9853)
DNA (861bp) protein (287aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SYN0_LEIAQ rbh
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ERK70348.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
aldo/keto reductase rbh
SCNpilot_cont_500_bf_scaffold_2035_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9891..10862)
DNA (972bp) protein (324aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP43_LEIAQ rbh
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ERK70349.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
aldo/keto reductase rbh
SCNpilot_cont_500_bf_scaffold_2035_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10911..11594
DNA (684bp) protein (228aa)
Metallo-beta-lactamase domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R513_LEIAQ rbh
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERK70350.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
beta-lactamase domain-containing protein
SCNpilot_cont_500_bf_scaffold_2035_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11722..12621)
DNA (900bp) protein (300aa)
NAD dependent epimerase/dehydratase family protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RND1_LEIAQ rbh
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ERK70351.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
NAD-dependent epimerase/dehydratase rbh
SCNpilot_cont_500_bf_scaffold_2035_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12673..13272
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9G6_LEIAQ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK71342.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
regulatory protein TetR
SCNpilot_cont_500_bf_scaffold_2035_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13312..13560)
DNA (249bp) protein (83aa)
Glutaredoxin n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RR78_LEIAQ
Glutaredoxin {ECO:0000313|EMBL:ERK71341.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
grx; glutaredoxin
SCNpilot_cont_500_bf_scaffold_2035_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13570..14160)
DNA (591bp) protein (197aa)
Putative fructose transport system kinase (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8B6_LEIAQ
Putative fructose transport system kinase {ECO:0000313|EMBL:ERK71465.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative kinase
SCNpilot_cont_500_bf_scaffold_2035_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14515..15942
DNA (1428bp) protein (476aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=G2UJW1_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ40466.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_cont_500_bf_scaffold_2035_17
Acinetobacter bereziniae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15939..16364
DNA (426bp) protein (142aa)
Uncharacterized protein (Fragment) n=1 Tax=Acinetobacter bereziniae CIP 70.12 RepID=N9EGH3_ACIBZ
Uncharacterized protein {ECO:0000313|EMBL:ENV91843.1}; Flags: Fragment;; TaxID=1217650 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter bereziniae CIP 70.12.;"
hypothetical protein
Displaying 17 items

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