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SCNpilot_cont_500_bf_scaffold_2058

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2058_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..982
DNA (981bp) protein (327aa)
Outer membrane insertion signal domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6B0_LEIAQ rbh
Outer membrane insertion signal domain protein {ECO:0000313|EMBL:ERK70252.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hemagglutinin/hemolysin-like protein
SCNpilot_cont_500_bf_scaffold_2058_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(960..2177)
DNA (1218bp) protein (406aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNU7_LEIAQ rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK70254.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar transporter rbh
SCNpilot_cont_500_bf_scaffold_2058_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2309..2857)
DNA (549bp) protein (183aa)
Isochorismatase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RN21_LEIAQ rbh
Isochorismatase family protein {ECO:0000313|EMBL:ERK70256.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
isochorismatase hydrolase
SCNpilot_cont_500_bf_scaffold_2058_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2854..4338)
DNA (1485bp) protein (495aa)
Permease, cytosine/purine, uracil, thiamine, allantoin family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6B6_LEIAQ rbh
Permease, cytosine/purine, uracil, thiamine, allantoin family {ECO:0000313|EMBL:ERK70257.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
permease for cytosine/purines uracil thiamine allantoin rbh
SCNpilot_cont_500_bf_scaffold_2058_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4423..5298
DNA (876bp) protein (292aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
purU; formyletrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10] rbh
Formyltetrahydrofolate deformylase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SYC7_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_2058_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5318..5683
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNV1_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70259.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2058_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5680..6834
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000373BB90 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70260.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
N-acetylglucosamine-6-phosphate deacetylase
SCNpilot_cont_500_bf_scaffold_2058_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6981..7766)
DNA (786bp) protein (262aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SYB5_LEIAQ rbh
N-acetylglucosamine-6-phosphate isomerase rbh
SCNpilot_cont_500_bf_scaffold_2058_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7759..8661)
DNA (903bp) protein (301aa)
ROK family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNU1_LEIAQ rbh
ROK family protein {ECO:0000313|EMBL:ERK70249.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ROK family protein
SCNpilot_cont_500_bf_scaffold_2058_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8658..10193)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003601D58 rbh
Glycosyl hydrolase family 3 protein {ECO:0000313|EMBL:ERK71090.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar hydrolase rbh
SCNpilot_cont_500_bf_scaffold_2058_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10190..11089)
DNA (900bp) protein (300aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQI3_LEIAQ rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK71091.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2058_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11086..12054)
DNA (969bp) protein (323aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T8R7_LEIAQ rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK71092.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_2058_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12151..13497)
DNA (1347bp) protein (449aa)
ABC transporter, solute-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T0S4_LEIAQ rbh
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERK71093.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_2058_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13596..14813)
DNA (1218bp) protein (406aa)
ROK family protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRA7_LEIAQ rbh
ROK family protein {ECO:0000313|EMBL:ERK71094.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ROK family protein
SCNpilot_cont_500_bf_scaffold_2058_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14878..15735
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036C3FDD
Putative 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase {ECO:0000313|EMBL:ERK69957.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2058_16
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15774..16709)
DNA (936bp) protein (312aa)
Putative oxidoreductase n=1 Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q9RL57_STRCO
SCF51A.07c; oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:CAB56659.1}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).;"
SCNpilot_cont_500_bf_scaffold_2058_17
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16794..17378
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI000366294C
TetR family transcriptional regulator {ECO:0000313|EMBL:EYT81512.1}; Flags: Fragment;; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
SCF51A.08; tetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2058_18
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17454..17813
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00037593F7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL17046.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_500_bf_scaffold_2058_19
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17836..18768)
DNA (933bp) protein (311aa)
Thioredoxin reductase n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XJI9_9PSEU
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain containing protein {ECO:0000313|EMBL:ETT24321.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_cont_500_bf_scaffold_2058_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18827..19066
DNA (240bp) protein (80aa)
DNA-binding helix-turn-helix protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SXP9_LEIAQ
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK70003.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
XRE family transcriptional regulator
Displaying 20 items

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