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SCNpilot_cont_500_bf_scaffold_2103

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2103_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..168)
DNA (168bp) protein (56aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQJ4_LEIAQ
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK70864.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2103_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(395..1339)
DNA (945bp) protein (315aa)
Transcriptional regulator, DeoR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVQ1_LEIAQ rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ERK72851.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
DeoR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2103_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1663..2904
DNA (1242bp) protein (414aa)
ABC transporter, solute-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RC76_LEIAQ rbh
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERK72850.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC-type sugar transport system, periplasmic component rbh
SCNpilot_cont_500_bf_scaffold_2103_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2911..3864
DNA (954bp) protein (318aa)
Putative ATP synthase F0, A subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWE2_LEIAQ rbh
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:ERK72849.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
permease component of ABC-type sugar transporter; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2103_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3861..4943
DNA (1083bp) protein (361aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5U1_LEIAQ rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK72848.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC-type sugar transport system, permease component; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2103_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5916..6788)
DNA (873bp) protein (291aa)
streptomycin 3''-kinase (EC:2.7.1.87)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000376CA83 rbh
Aminoglycoside/hydroxyurea antibiotic resistance kinase {ECO:0000313|EMBL:ERK72847.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_2103_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6785..7534)
DNA (750bp) protein (250aa)
Transcriptional regulator, AraC family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T4T1_LEIAQ rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERK72458.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2103_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7618..8226
DNA (609bp) protein (203aa)
Acetyltransferase, GNAT family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCP0_LEIAQ rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK72457.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative GCN5-related N-acetyltransferase
SCNpilot_cont_500_bf_scaffold_2103_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8237..8809)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUN8_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72456.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2103_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8825..9061)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RB59_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72455.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2103_11
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9129..10634)
DNA (1506bp) protein (502aa)
abfA; putative alpha-N-arabinofuranosidase; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55] rbh
alpha-N-arabinofuranosidase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036EACC4 rbh
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:KHK99901.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_cont_500_bf_scaffold_2103_12
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10682..11632)
DNA (951bp) protein (317aa)
ABC transporter permease n=1 Tax=Agromyces subbeticus RepID=UPI0003B5C3E4 rbh
ABC transporter permease {ECO:0000313|EMBL:KJC64027.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
ABC transporter permease
SCNpilot_cont_500_bf_scaffold_2103_13
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11629..12576)
DNA (948bp) protein (316aa)
ABC transporter permease n=1 Tax=Agromyces italicus RepID=UPI0003B48CA9 rbh
ABC transporter permease {ECO:0000313|EMBL:KGM11778.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2103_14
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12662..13984)
DNA (1323bp) protein (441aa)
ABC transporter substrate-binding protein n=1 Tax=Agromyces italicus RepID=UPI0003B62AD3 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM11777.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
putative ABC transporter substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2103_15
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14087..15115)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00037EBDFF rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KJC64025.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2103_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15239..15757)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCN2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72447.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_2103_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15909..16916
DNA (1008bp) protein (336aa)
Putative mycothiol biosynthesis acetyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUN0_LEIAQ rbh
Putative mycothiol biosynthesis acetyltransferase {ECO:0000313|EMBL:ERK72446.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
N-acetyltransferase GCN5 rbh
SCNpilot_cont_500_bf_scaffold_2103_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17829..18431)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R495_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70080.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_2103_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18535..18732
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036F348A
Uncharacterized protein {ECO:0000313|EMBL:ERK70318.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_2103_20
unknown

Not on your lists

18687..18836
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2103_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19279..19950
DNA (672bp) protein (224aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T004_LEIAQ
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ERK70833.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_2103_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19947..20054
DNA (108bp) protein (36aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7Z5_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70832.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Displaying 22 items

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