ggKbase home page

SCNpilot_cont_500_bf_scaffold_2226

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2226_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..931)
DNA (930bp) protein (310aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9U2_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72010.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2226_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1073..1822)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RBZ6_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72770.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2226_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1825..2664)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVG2_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72771.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Fimbrial assembly family protein
SCNpilot_cont_500_bf_scaffold_2226_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2661..3710)
DNA (1050bp) protein (350aa)
Cell division protein FtsA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TDI5_LEIAQ rbh
Cell division protein FtsA {ECO:0000313|EMBL:ERK72772.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM
SCNpilot_cont_500_bf_scaffold_2226_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3730..4569)
DNA (840bp) protein (280aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
prepilin signal peptidase PulO-like peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5J9_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_2226_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4566..6332)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW68_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72774.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2226_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6329..7060)
DNA (732bp) protein (244aa)
Prepilin-type cleavage/methylation protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RC01_LEIAQ rbh
Prepilin-type cleavage/methylation protein {ECO:0000313|EMBL:ERK72775.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_2226_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7060..8448)
DNA (1389bp) protein (463aa)
Prepilin-type cleavage/methylation protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVG9_LEIAQ rbh
Prepilin-type cleavage/methylation protein {ECO:0000313|EMBL:ERK72776.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
mucin-2-like
SCNpilot_cont_500_bf_scaffold_2226_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8546..9019)
DNA (474bp) protein (158aa)
Fimbrial family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TDI9_LEIAQ
Fimbrial family protein {ECO:0000313|EMBL:ERK72777.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
secretory protein
SCNpilot_cont_500_bf_scaffold_2226_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9195..10421)
DNA (1227bp) protein (409aa)
Putative type IV fimbrial assembly protein PilC n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5K5_LEIAQ rbh
Putative type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:ERK72778.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
type II secretory pathway, component PulF; K02653 type IV pilus assembly protein PilC
SCNpilot_cont_500_bf_scaffold_2226_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10421..12064)
DNA (1644bp) protein (548aa)
Twitching motility protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW73_LEIAQ rbh
Twitching motility protein {ECO:0000313|EMBL:ERK72779.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
twitching motility protein
SCNpilot_cont_500_bf_scaffold_2226_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12073..13737)
DNA (1665bp) protein (555aa)
Putative type 4 fimbrial assembly protein PilB (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RC06_LEIAQ rbh
Putative type 4 fimbrial assembly protein PilB {ECO:0000313|EMBL:ERK72780.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
type II secretion system protein E; K02652 type IV pilus assembly protein PilB
SCNpilot_cont_500_bf_scaffold_2226_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13942..14172)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9V8_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71482.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2226_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14274..15590)
DNA (1317bp) protein (439aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T1Z9_LEIAQ
Displaying 14 items

View Taxonomy