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SCNpilot_cont_500_bf_scaffold_2530

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2530_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..800
DNA (798bp) protein (266aa)
Cytochrome b/b6 family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCS9_LEIAQ
Cytochrome b/b6 family protein {ECO:0000313|EMBL:ERK72507.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ubiquinol-cytochrome C reductase cytochrome B subunit
SCNpilot_cont_500_bf_scaffold_2530_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

889..1728
DNA (840bp) protein (280aa)
macrolide-resistance protein; K00563 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
Methyltransferase domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUS8_LEIAQ rbh
Methyltransferase domain protein {ECO:0000313|EMBL:ERK72506.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_2530_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1697..2338)
DNA (642bp) protein (214aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RBA0_LEIAQ rbh
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERK72505.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
haloacid dehalogenase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_cont_500_bf_scaffold_2530_4
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2422..3408)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036DDFC6
Uncharacterized protein {ECO:0000313|EMBL:KGJ71762.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
SCNpilot_cont_500_bf_scaffold_2530_5
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3405..3752)
DNA (348bp) protein (116aa)
Transcriptional regulator, PadR-like family n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J120_FRASU
Uncharacterized protein {ECO:0000313|EMBL:KFF58360.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
PadR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2530_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3779..5200)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVF9_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72504.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2530_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5360..5782)
DNA (423bp) protein (141aa)
Cytochrome c oxidase polypeptide 4 {ECO:0000256|PIRNR:PIRNR017385}; EC=1.9.3.1 {ECO:0000256|PIRNR:PIRNR017385};; Cytochrome aa3 subunit 4 {ECO:0000256|PIRNR:PIRNR017385}; Cytochrome c oxidase polypeptide IV {ECO:0000256|PIRNR:PIRNR017385}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Cytochrome c oxidase polypeptide 4 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T4W4_LEIAQ
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2530_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5786..7420)
DNA (1635bp) protein (545aa)
Cytochrome c oxidase subunit 1 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCS5_LEIAQ
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:ERK72502.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
cytochrome C oxidase subunit I
SCNpilot_cont_500_bf_scaffold_2530_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7430..8317)
DNA (888bp) protein (296aa)
ctaC; cytochrome C oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] rbh
Cytochrome c oxidase subunit II n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUS4_LEIAQ rbh
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:ERK72501.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_2530_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8462..8818)
DNA (357bp) protein (119aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RB96_LEIAQ
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ERK72500.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2530_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8916..10352)
DNA (1437bp) protein (479aa)
Peptidase dimerization domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVF5_LEIAQ rbh
Peptidase dimerization domain protein {ECO:0000313|EMBL:ERK72499.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2530_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10393..10989
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T4W2_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72498.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2530_13
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10991..11956
DNA (966bp) protein (322aa)
ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4] rbh
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036F9BD7 rbh
SCNpilot_cont_500_bf_scaffold_2530_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11924..12967)
DNA (1044bp) protein (348aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R7Y0_LEIAQ rbh
dihydroorotate dehydrogenase 2 rbh
SCNpilot_cont_500_bf_scaffold_2530_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12993..13466)
DNA (474bp) protein (158aa)
Transcriptional repressor NrdR n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RS10_LEIAQ rbh
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR
SCNpilot_cont_500_bf_scaffold_2530_16
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13494..14801)
DNA (1308bp) protein (436aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] rbh
Histidinol dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01024}; Short=HDH {ECO:0000255|HAMAP-Rule:MF_01024};; EC=1.1.1.23 {ECO:0000255|HAMAP-Rule:MF_01024};; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
histidinol dehydrogenase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035E5D52 rbh
SCNpilot_cont_500_bf_scaffold_2530_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14883..15413
DNA (531bp) protein (177aa)
Flavin reductase-like protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T2M6_LEIAQ rbh
Flavin reductase-like protein {ECO:0000313|EMBL:ERK71743.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
flavin-dependent reductase
SCNpilot_cont_500_bf_scaffold_2530_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15438..15803)
DNA (366bp) protein (122aa)
Cupin domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TAK0_LEIAQ
Cupin domain protein {ECO:0000313|EMBL:ERK71742.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
cupin domain-containing protein
SCNpilot_cont_500_bf_scaffold_2530_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15813..19328)
DNA (3516bp) protein (1172aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Putative DNA polymerase III subunit alpha n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSC6_LEIAQ rbh
DNA polymerase III subunit alpha rbh
SCNpilot_cont_500_bf_scaffold_2530_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19489..20409)
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rlu; ribosomal large subunit pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] rbh
Pseudouridine synthase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R903_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_2530_21
unknown

Not on your lists

20538..20864
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2530_22
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20982..21803)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036AE3CE rbh
cell division initiation protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW41672.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_2530_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21850..22146)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TC14_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72247.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2530_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22230..22514)
DNA (285bp) protein (95aa)
Cell division protein SepF n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTZ2_LEIAQ
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2530_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22756..23457)
DNA (702bp) protein (234aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAG3_LEIAQ rbh
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:ERK72245.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2530_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23423..24025)
DNA (603bp) protein (201aa)
Cell division protein FtsZ n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUL9_LEIAQ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ
Displaying 26 items

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