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SCNpilot_cont_500_bf_scaffold_312

Search features with annotation key words

Displaying items 1-30 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_312_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..118)
DNA (117bp) protein (39aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6L9_LEIAQ
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
dnaA; chromosome replication initiator DnaA; K02313 chromosomal replication initiator protein
SCNpilot_cont_500_bf_scaffold_312_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

572..985
DNA (414bp) protein (138aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Ribonuclease P protein component n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWI4_LEIAQ
hypothetical protein
SCNpilot_cont_500_bf_scaffold_312_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1003..1329
DNA (327bp) protein (109aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEL0_LEIAQ
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_312_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1339..2313
DNA (975bp) protein (325aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6M3_LEIAQ rbh
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:ERK73123.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
inner membrane protein translocase component YidC rbh
SCNpilot_cont_500_bf_scaffold_312_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2322..2879
DNA (558bp) protein (186aa)
R3H domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RX76_LEIAQ rbh
R3H domain protein {ECO:0000313|EMBL:ERK73124.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_312_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2894..3523
DNA (630bp) protein (210aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
gidB; 16S rRNA methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] rbh
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RD02_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_312_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3762..4169)
DNA (408bp) protein (136aa)
Endoribonuclease L-PSP n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWJ0_LEIAQ
Endoribonuclease L-PSP {ECO:0000313|EMBL:ERK73126.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
translation initiation inhibitor
SCNpilot_cont_500_bf_scaffold_312_8
unknown

Not on your lists

5194..6207
DNA (1014bp) protein (338aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_312_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6588..7505
DNA (918bp) protein (306aa)
chromosome partitioning protein ParA n=1 Tax=Leifsonia sp. 109 RepID=UPI000372086D rbh
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:ERK73127.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
parA; chromosome partitioning protein; K03496 chromosome partitioning protein rbh
SCNpilot_cont_500_bf_scaffold_312_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7713..8336
DNA (624bp) protein (208aa)
Putative stage 0 sporulation protein J n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6M9_LEIAQ
Putative stage 0 sporulation protein J {ECO:0000313|EMBL:ERK73128.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
chromosome partitioning protein
SCNpilot_cont_500_bf_scaffold_312_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8380..9345)
DNA (966bp) protein (322aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ddlB; putative D-alanine-D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]
D-alanine--D-alanine ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RX80_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_312_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9374..10696)
DNA (1323bp) protein (441aa)
Aminotransferase, class I/II n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RD04_LEIAQ rbh
Aminotransferase, class I/II {ECO:0000313|EMBL:ERK73130.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
avtA; valine-pyruvate aminotransferase rbh
SCNpilot_cont_500_bf_scaffold_312_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10835..11161)
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWJ4_LEIAQ
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
thioredoxin
SCNpilot_cont_500_bf_scaffold_312_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11175..12161)
DNA (987bp) protein (329aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Thioredoxin reductase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEL8_LEIAQ rbh
thioredoxin-disulfide reductase rbh
SCNpilot_cont_500_bf_scaffold_312_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12247..13857)
DNA (1611bp) protein (537aa)
Integral membrane protein MviN n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6N4_LEIAQ rbh
Integral membrane protein MviN {ECO:0000313|EMBL:ERK73133.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
mviN; hypothetical protein; K03980 virulence factor rbh
SCNpilot_cont_500_bf_scaffold_312_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13850..16216)
DNA (2367bp) protein (789aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RX86_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK73134.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_312_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16311..17735
DNA (1425bp) protein (475aa)
tRNA adenylyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RD09_LEIAQ rbh
tRNA adenylyltransferase {ECO:0000313|EMBL:ERK73135.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
poly(A) polymerase rbh
SCNpilot_cont_500_bf_scaffold_312_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18008..18385
DNA (378bp) protein (126aa)
30S ribosomal protein S6 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWJ9_LEIAQ
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
30S ribosomal protein S6
SCNpilot_cont_500_bf_scaffold_312_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18390..18899
DNA (510bp) protein (170aa)
Single-stranded DNA-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEM3_LEIAQ rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
single-stranded DNA-binding protein rbh
SCNpilot_cont_500_bf_scaffold_312_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18963..19226
DNA (264bp) protein (88aa)
30S ribosomal protein S18 n=2 Tax=Leifsonia RepID=U3PGC8_LEIXC
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_312_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19239..19691
DNA (453bp) protein (151aa)
50S ribosomal protein L9 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RX90_LEIAQ
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L9
SCNpilot_cont_500_bf_scaffold_312_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20209..21585
DNA (1377bp) protein (459aa)
Replicative DNA helicase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWK3_LEIAQ rbh
Replicative DNA helicase {ECO:0000313|EMBL:ERK73141.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
replicative DNA helicase rbh
SCNpilot_cont_500_bf_scaffold_312_23
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22020..23783
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P603_LEIXC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW41755.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_312_24
unknown

Not on your lists

23786..23983
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_312_25
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24427..25104)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A691_CELGA
Uncharacterized protein {ECO:0000313|EMBL:KGM16120.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_312_26
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25208..25585)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI0003712D6B
Cupin domain protein {ECO:0000313|EMBL:ELP63840.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_312_27
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25656..26114
DNA (459bp) protein (153aa)
Putative MarR family transcriptional regulator n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3VGS2_9ACTO
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:GAC81164.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_312_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26132..26536
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEM7_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73142.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_312_29
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26529..26702)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034D2439
Uncharacterized protein {ECO:0000313|EMBL:KJL37106.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_500_bf_scaffold_312_30
unknown

Not on your lists

comp(26803..27507)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003684D7D
Displaying items 1-30 of 156 in total

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