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SCNpilot_cont_500_bf_scaffold_571

Search features with annotation key words

Displaying items 1-30 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_571_1
unknown

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_571_2
unknown

Not on your lists

496..696
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_571_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

693..1580
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SXS0_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70028.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_571_4
unknown

Not on your lists

1577..1963
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_571_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2025..2270
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMG2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70026.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_571_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2326..3141
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SXS0_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70028.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_571_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3138..3785
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RN94_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70029.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_571_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3785..4060
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R456_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70030.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_571_9
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4104..4700)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZV7_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47273.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_571_10
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4934..6523
DNA (1590bp) protein (530aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
methionyl-tRNA synthetase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000371623A rbh
methionyl-tRNA synthetase rbh
SCNpilot_cont_500_bf_scaffold_571_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6520..7449
DNA (930bp) protein (310aa)
Hydrolase, TatD family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZY3_LEIAQ rbh
Hydrolase, TatD family {ECO:0000313|EMBL:ERK70813.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sec-independent protein TadD rbh
SCNpilot_cont_500_bf_scaffold_571_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7446..8294
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7X7_LEIAQ rbh
dimethyladenosine transferase rbh
SCNpilot_cont_500_bf_scaffold_571_13
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8351..9295
DNA (945bp) protein (315aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Microbacteriaceae RepID=UPI00035C8733
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
SCNpilot_cont_500_bf_scaffold_571_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9481..12405)
DNA (2925bp) protein (975aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003821D01 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK69363.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
DNA primase rbh
SCNpilot_cont_500_bf_scaffold_571_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12445..13617)
DNA (1173bp) protein (391aa)
ROK family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RLC3_LEIAQ rbh
ROK family protein {ECO:0000313|EMBL:ERK69364.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ROK family protein rbh
SCNpilot_cont_500_bf_scaffold_571_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13846..14970
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R267_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK69365.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
periplasmic binding protein/laci transcriptional regulator; K10439 ribose transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_571_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15056..15565
DNA (510bp) protein (170aa)
Phosphotriesterase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RKF4_LEIAQ
Phosphotriesterase family protein {ECO:0000313|EMBL:ERK69366.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
aryldialkylphosphatase; K07048 phosphotriesterase-related protein
SCNpilot_cont_500_bf_scaffold_571_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15586..15948
DNA (363bp) protein (121aa)
Phosphotriesterase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RKF4_LEIAQ
Phosphotriesterase family protein {ECO:0000313|EMBL:ERK69366.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
aryldialkylphosphatase; K07048 phosphotriesterase-related protein
SCNpilot_cont_500_bf_scaffold_571_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15945..16880
DNA (936bp) protein (312aa)
ROK family protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3R7_LEIAQ rbh
ROK family protein {ECO:0000313|EMBL:ERK69367.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ROK family protein
SCNpilot_cont_500_bf_scaffold_571_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16877..17857
DNA (981bp) protein (327aa)
Putative ribose transport system permease protein RbsC n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RXX2_LEIAQ rbh
Putative ribose transport system permease protein RbsC {ECO:0000313|EMBL:ERK73591.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
inner-membrane translocator; K10440 ribose transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_571_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17867..19093
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TFX3_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK73592.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative amino acid racemase rbh
SCNpilot_cont_500_bf_scaffold_571_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19090..19830
DNA (741bp) protein (247aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7Y0_LEIAQ rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK73593.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter-like protein rbh
SCNpilot_cont_500_bf_scaffold_571_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19845..20867
DNA (1023bp) protein (341aa)
glutamine--fructose-6-phosphate transaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
SIS domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RYK8_LEIAQ rbh
SIS domain protein {ECO:0000313|EMBL:ERK73594.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_571_24
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20877..22688)
DNA (1812bp) protein (604aa)
ABC transporter ATPase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034835A8
ABC transporter ATPase {ECO:0000313|EMBL:KEP75170.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
ATPase components of ABC transporters with duplicated ATPase domains
SCNpilot_cont_500_bf_scaffold_571_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22718..23254)
DNA (537bp) protein (179aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RHZ7_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK68204.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
acetyltransferase, ribosomal protein N-acetylase
SCNpilot_cont_500_bf_scaffold_571_26
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23292..24893
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036249CB rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EME21883.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
acyl-CoA dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_571_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24970..27486)
DNA (2517bp) protein (839aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TD03_LEIAQ rbh
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:ERK72582.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
teichoic acid synthase rbh
SCNpilot_cont_500_bf_scaffold_571_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27626..28102)
DNA (477bp) protein (159aa)
Transcriptional regulator, MarR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUY9_LEIAQ rbh
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERK72581.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_571_trna_1
unknown

Not on your lists

28224..28295
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_571_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28327..29751
DNA (1425bp) protein (475aa)
Bifunctional protein GlmU n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RBG1_LEIAQ rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
UDP-N-acetylglucosamine pyrophosphorylase rbh
Displaying items 1-30 of 252 in total

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