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SCNpilot_cont_500_bf_scaffold_1017

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1017_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..100)
DNA (99bp) protein (33aa)
Riboflavin biosynthesis protein RibD protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7J0_LEIAQ
Riboflavin biosynthesis protein RibD protein {ECO:0000313|EMBL:ERK70672.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1017_2
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(113..745)
DNA (633bp) protein (211aa)
Hypothetical membrane protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B9N2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDP90743.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
hypothetical membrane protein
SCNpilot_cont_500_bf_scaffold_1017_3
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(724..1767)
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BX03_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ78678.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_500_bf_scaffold_1017_4
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1897..2505
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003604A6F
ArsR family transcriptional regulator {ECO:0000313|EMBL:KJY25712.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1017_5
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2510..3808
DNA (1299bp) protein (433aa)
Major facilitator superfamily transporter MFS_1 n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LXX5_9ACTO rbh
major facilitator superfamily transporter MFS_1 rbh
Major facilitator superfamily transporter MFS_1 {ECO:0000313|EMBL:AGL20534.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_500_bf_scaffold_1017_6
unknown

Not on your lists

3926..4297
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1017_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4307..4543)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037D94A9
nicotinic acid phosphoribosyltransferase
Nicotinic acid phosphoribosyltransferase {ECO:0000313|EMBL:BAJ74014.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_1017_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4504..5205)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037D94A9
nicotinic acid phosphoribosyltransferase
Nicotinic acid phosphoribosyltransferase {ECO:0000313|EMBL:BAJ74014.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_1017_9
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5283..5759)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6AC88_LEIXX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAT90005.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_500_bf_scaffold_1017_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5833..6543)
DNA (711bp) protein (237aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7J5_LEIAQ rbh
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ERK70677.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
short chain oxidoreductase
SCNpilot_cont_500_bf_scaffold_1017_11
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6617..7477
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000376ECF3 rbh
Putative MmyB family DNA-binding protein {ECO:0000313|EMBL:GAC69880.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
Cro/CI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1017_12
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7562..7870
DNA (309bp) protein (103aa)
XRE family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B4ACB5
Uncharacterized protein {ECO:0000313|EMBL:KFF59204.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1017_13
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7874..9217
DNA (1344bp) protein (448aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B41035 rbh
HipA-like protein {ECO:0000313|EMBL:EGO93452.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCNpilot_cont_500_bf_scaffold_1017_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9234..10928
DNA (1695bp) protein (565aa)
putative acyl-CoA synthetase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
AMP-binding enzyme n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RV66_LEIAQ rbh
AMP-binding enzyme {ECO:0000313|EMBL:ERK72429.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1017_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10948..12600)
DNA (1653bp) protein (551aa)
Amidohydrolase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUJ2_LEIAQ rbh
Amidohydrolase family protein {ECO:0000313|EMBL:ERK72431.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein; K07047
SCNpilot_cont_500_bf_scaffold_1017_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12750..13442
DNA (693bp) protein (231aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCL1_LEIAQ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK72432.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1017_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13467..13916
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T4N6_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72433.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1017_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13937..15445)
DNA (1509bp) protein (503aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
carboxylesterase type B; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
Carboxylesterase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RV71_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_1017_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15442..16041)
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RB24_LEIAQ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK72435.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1017_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16078..17145)
DNA (1068bp) protein (356aa)
Sugar-binding domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCL6_LEIAQ rbh
Sugar-binding domain protein {ECO:0000313|EMBL:ERK72437.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ccpA2; glucose-resistance amylase regulator rbh
SCNpilot_cont_500_bf_scaffold_1017_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17355..18221
DNA (867bp) protein (289aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RV84_LEIAQ rbh
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:ERK72439.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
amino acid ABC transporter substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1017_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18241..19029
DNA (789bp) protein (263aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RB40_LEIAQ rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK72440.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
amino acid ABC transporter permease rbh
SCNpilot_cont_500_bf_scaffold_1017_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19026..19796
DNA (771bp) protein (257aa)
General L-amino acid ABC transporter, ATP-binding protein AapP n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUL1_LEIAQ rbh
General L-amino acid ABC transporter, ATP-binding protein AapP {ECO:0000313|EMBL:ERK72441.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
amino acid ABC transporter ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1017_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19793..20812
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000377CC33 rbh
Oxidoreductase family, alpha/beta domain protein {ECO:0000313|EMBL:ERK69263.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_1017_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20818..21996
DNA (1179bp) protein (393aa)
FAD dependent oxidoreductase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R6I9_LEIAQ rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ERK70860.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
glycine/D-amino acid oxidase rbh
SCNpilot_cont_500_bf_scaffold_1017_26
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22021..22620)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W0D2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC58552.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1017_27
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22617..23198)
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:EXJ50740.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_cont_500_bf_scaffold_1017_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23333..24334
DNA (1002bp) protein (334aa)
SIS domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPV7_LEIAQ rbh
SIS domain protein {ECO:0000313|EMBL:ERK70871.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
frlB; glucosamine-fructose-6-phosphate aminotransferase / fructose lysine 6-phosphate deglycase frlB rbh
SCNpilot_cont_500_bf_scaffold_1017_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24345..25268
DNA (924bp) protein (308aa)
Kinase, PfkB family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T841_LEIAQ rbh
Kinase, PfkB family {ECO:0000313|EMBL:ERK70872.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar kinase PfkB/FrlD rbh
SCNpilot_cont_500_bf_scaffold_1017_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25265..26395
DNA (1131bp) protein (377aa)
Sugar-binding domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T044_LEIAQ rbh
Sugar-binding domain protein {ECO:0000313|EMBL:ERK70873.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Displaying items 1-30 of 33 in total

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