ggKbase home page

SCNpilot_cont_500_bf_scaffold_1153

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1153_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..278)
DNA (276bp) protein (92aa)
Transcriptional regulator, GntR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T877_LEIAQ
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERK70902.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1153_2
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

410..1681
DNA (1272bp) protein (424aa)
MFS superfamily transporter n=1 Tax=Brevibacterium casei S18 RepID=K9AP44_9MICO
MFS superfamily transporter {ECO:0000313|EMBL:EKU49188.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
inner membrane metabolite transport protein YhjE
SCNpilot_cont_500_bf_scaffold_1153_3
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1759..3417)
DNA (1659bp) protein (553aa)
acetolactate synthase (EC:2.2.1.6) rbh
Acetolactate synthase {ECO:0000313|EMBL:AEG44427.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AEG44427.1};; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
Acetolactate synthase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FVK0_ISOV2 rbh
SCNpilot_cont_500_bf_scaffold_1153_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3634..4689)
DNA (1056bp) protein (352aa)
Putative LacI transcriptional repressor n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUU5_LEIAQ rbh
Putative LacI transcriptional repressor {ECO:0000313|EMBL:ERK72526.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1153_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4833..5765
DNA (933bp) protein (311aa)
ABC transporter permease n=1 Tax=Leifsonia sp. 109 RepID=UPI0003746884 rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK72525.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_1153_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5765..6619
DNA (855bp) protein (285aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVH5_LEIAQ
ABC transporter, permease protein {ECO:0000313|EMBL:ERK72524.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_1153_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6691..8040
DNA (1350bp) protein (450aa)
ABC transporter, solute-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T4Y1_LEIAQ rbh
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERK72523.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1153_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8113..9885
DNA (1773bp) protein (591aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
bgaB; putative beta-galactosidase (EC:3.2.1.23) rbh
Beta-galactosidase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCU6_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_1153_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9886..10191)
DNA (306bp) protein (102aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SVI6_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK69323.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1153_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10242..10415)
DNA (174bp) protein (58aa)
carboxylesterase type B; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3L7_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK69322.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1153_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10412..11698)
DNA (1287bp) protein (429aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Para-nitrobenzyl esterase domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SMB7_LEIAQ rbh
carboxylesterase type B
SCNpilot_cont_500_bf_scaffold_1153_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11891..12706
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSV2_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK71629.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1153_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12764..14227)
DNA (1464bp) protein (488aa)
Citrate transporter n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8P4_LEIAQ rbh
Citrate transporter {ECO:0000313|EMBL:ERK71630.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Mg++/citrate complex transporter rbh
SCNpilot_cont_500_bf_scaffold_1153_14
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14415..16073
DNA (1659bp) protein (553aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
Two-component system sensor protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P4Z0_LEIXC rbh
two-component system sensor protein rbh
SCNpilot_cont_500_bf_scaffold_1153_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16070..16729
DNA (660bp) protein (220aa)
Transcriptional regulatory protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SY74_LEIAQ rbh
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
two-component system regulatory protein rbh
SCNpilot_cont_500_bf_scaffold_1153_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16713..17042)
DNA (330bp) protein (110aa)
DGPF domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T664_LEIAQ
DGPF domain protein {ECO:0000313|EMBL:ERK70202.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1153_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17187..17630
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMX2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70201.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1153_18
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17602..18639)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA0539 RepID=UPI000314C099 rbh
Iron ABC transporter {ECO:0000313|EMBL:AKG46511.1}; TaxID=408015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
Iron ABC transporter rbh
SCNpilot_cont_500_bf_scaffold_1153_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18636..19646)
DNA (1011bp) protein (337aa)
Ferric enterobactin transport system permease protein FepD family protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RN58_LEIAQ rbh
Ferric enterobactin transport system permease protein FepD family protein {ECO:0000313|EMBL:ERK69989.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transport system permease protein; K02015 iron complex transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1153_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19643..20671)
DNA (1029bp) protein (343aa)
Periplasmic binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R522_LEIAQ rbh
Periplasmic binding protein {ECO:0000313|EMBL:ERK70360.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Fe3+-hydroxamate ABC transporter periplasmic protein; K02016 iron complex transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1153_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20716..21657
DNA (942bp) protein (314aa)
Siderophore-interacting FAD-binding domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP55_LEIAQ rbh
Siderophore-interacting FAD-binding domain protein {ECO:0000313|EMBL:ERK70359.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
siderophore-interacting protein
SCNpilot_cont_500_bf_scaffold_1153_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21659..22390)
DNA (732bp) protein (244aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Signal peptidase I n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SYN9_LEIAQ rbh
signal peptidase I
SCNpilot_cont_500_bf_scaffold_1153_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22521..23933
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036B175F
Peptidase, M23 family {ECO:0000313|EMBL:ERK73356.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
cell wall binding protein
SCNpilot_cont_500_bf_scaffold_1153_24
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24013..25347
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00037AA686 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAT89550.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_500_bf_scaffold_1153_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25372..26586)
DNA (1215bp) protein (405aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9V1_LEIAQ rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK72020.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative major facilitator superfamily transporter rbh
SCNpilot_cont_500_bf_scaffold_1153_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26583..27203)
DNA (621bp) protein (207aa)
Transcriptional regulator, GntR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTC0_LEIAQ rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERK72021.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1153_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27252..28682)
DNA (1431bp) protein (477aa)
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBF7_LEIAQ rbh
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family {ECO:0000313|EMBL:ERK72022.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative monooxygenase rbh
SCNpilot_cont_500_bf_scaffold_1153_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28712..28927)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3H9_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72023.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1153_29
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29013..29651)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036419F0
Uncharacterized protein {ECO:0000313|EMBL:AJW79911.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
SCNpilot_cont_500_bf_scaffold_1153_30
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29750..30520)
DNA (771bp) protein (257aa)
Putative enoyl-CoA hydratase echA8 {ECO:0000313|EMBL:KJL23264.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJL23264.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
paaG; putative enoyl-CoA hydratase PaaG (EC:4.2.1.17) rbh
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003720FF8 rbh
Displaying items 1-30 of 51 in total

View Taxonomy