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SCNpilot_cont_500_bf_scaffold_1188

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1188_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..464
DNA (462bp) protein (154aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9L1_LEIAQ
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ERK71935.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1188_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

461..1357
DNA (897bp) protein (299aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSZ7_LEIAQ rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK71936.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1188_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1344..2057
DNA (714bp) protein (238aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TB64_LEIAQ rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK71937.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
livF; branched-chain amino acid transport ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1188_4
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2160..5723
DNA (3564bp) protein (1188aa)
chromosome segregation protein SMC n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035CB6BA rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
chromosome segregation protein rbh
SCNpilot_cont_500_bf_scaffold_1188_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5740..6051
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035FB498
Uncharacterized protein {ECO:0000313|EMBL:ERK66506.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1188_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6069..6368)
DNA (300bp) protein (100aa)
CHAD domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7K3_LEIAQ
CHAD domain protein {ECO:0000313|EMBL:ERK70687.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1188_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6808..7683
DNA (876bp) protein (292aa)
Signal recognition particle receptor FtsY n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPB5_LEIAQ rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
signal recognition particle receptor rbh
SCNpilot_cont_500_bf_scaffold_1188_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7693..8193
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R601_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70685.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1188_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8226..9797
DNA (1572bp) protein (524aa)
Signal recognition particle protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQ28_LEIAQ rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
signal recognition particle subunit SRP54 rbh
SCNpilot_cont_500_bf_scaffold_1188_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9870..10574)
DNA (705bp) protein (235aa)
GDSL-like protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZK1_LEIAQ rbh
GDSL-like protein {ECO:0000313|EMBL:ERK70683.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1188_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10663..11370)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RU19_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72271.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1188_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11434..12570)
DNA (1137bp) protein (379aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Carboxylate-amine ligase N136_01360 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TC41_LEIAQ rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1188_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12754..13230
DNA (477bp) protein (159aa)
30S ribosomal protein S16 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T447_LEIAQ rbh
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
30S ribosomal protein S16
SCNpilot_cont_500_bf_scaffold_1188_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13235..13465
DNA (231bp) protein (77aa)
UPF0109 protein N136_01362 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUP9_LEIAQ
UPF0109 protein N136_01362 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1188_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13467..14168
DNA (702bp) protein (234aa)
Ribosome maturation factor RimM n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAJ7_LEIAQ rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
16S rRNA-processing protein RimM rbh
SCNpilot_cont_500_bf_scaffold_1188_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14221..14883)
DNA (663bp) protein (221aa)
FCD domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RU25_LEIAQ rbh
FCD domain protein {ECO:0000313|EMBL:ERK72276.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1188_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14970..16178
DNA (1209bp) protein (403aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TC45_LEIAQ rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK72277.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar transporter
SCNpilot_cont_500_bf_scaffold_1188_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16189..16875
DNA (687bp) protein (229aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] rbh
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T454_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_1188_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16887..17651)
DNA (765bp) protein (255aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] rbh
Methionine aminopeptidase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUQ5_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_1188_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17774..18268
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAK3_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72280.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
heat shock protein
SCNpilot_cont_500_bf_scaffold_1188_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18464..18811
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RU31_LEIAQ
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
SCNpilot_cont_500_bf_scaffold_1188_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18900..19646
DNA (747bp) protein (249aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Signal peptidase I n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TC49_LEIAQ rbh
signal peptidase I
SCNpilot_cont_500_bf_scaffold_1188_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19643..20308
DNA (666bp) protein (222aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Ribonuclease n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T459_LEIAQ rbh
ribonuclease HII
SCNpilot_cont_500_bf_scaffold_1188_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20338..20661
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUR1_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72284.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1188_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20766..21122
DNA (357bp) protein (119aa)
UPF0102 protein N136_01373 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAK9_LEIAQ
UPF0102 protein N136_01373 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein; K07460 putative endonuclease
SCNpilot_cont_500_bf_scaffold_1188_26
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21122..22573
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000376B1FE
Uncharacterized protein {ECO:0000313|EMBL:EQM74380.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
Mg chelatase-like protein; K07391 magnesium chelatase family protein
SCNpilot_cont_500_bf_scaffold_1188_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22570..23841
DNA (1272bp) protein (424aa)
DNA protecting protein DprA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RLB7_LEIAQ rbh
DNA protecting protein DprA {ECO:0000313|EMBL:ERK69359.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
smf; DNA processing factor; K04096 DNA processing protein rbh
SCNpilot_cont_500_bf_scaffold_1188_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23854..24477)
DNA (624bp) protein (208aa)
Translocator protein, LysE family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R265_LEIAQ rbh
Translocator protein, LysE family {ECO:0000313|EMBL:ERK69360.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
lysine exporter protein LysE/YggA
SCNpilot_cont_500_bf_scaffold_1188_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24474..25049)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RKE7_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK69361.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1188_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25424..26329
DNA (906bp) protein (302aa)
Phage integrase, SAM-like domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3R1_LEIAQ rbh
Phage integrase, SAM-like domain protein {ECO:0000313|EMBL:ERK69362.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
xerC; tyrosine recombinase XerC; K03733 integrase/recombinase XerC rbh
Displaying items 1-30 of 69 in total

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