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SCNpilot_cont_500_bf_scaffold_1208

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1208_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..660
DNA (660bp) protein (220aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Glycerol kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RV24_LEIAQ
glycerol kinase
SCNpilot_cont_500_bf_scaffold_1208_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

829..2064
DNA (1236bp) protein (412aa)
Cell envelope-like function transcriptional attenuator common domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R4L3_LEIAQ rbh
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:ERK70205.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
LytR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1208_3
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2071..2289)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B567DF
Uncharacterized protein {ECO:0000313|EMBL:KFF58741.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
SCNpilot_cont_500_bf_scaffold_1208_4
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2439..3125
DNA (687bp) protein (229aa)
membrane protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B710B3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39917.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_1208_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3115..3861)
DNA (747bp) protein (249aa)
HAD hydrolase, family IA, variant 1 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP90_LEIAQ rbh
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:ERK70661.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hydrolase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_cont_500_bf_scaffold_1208_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3858..4451)
DNA (594bp) protein (198aa)
Acetyltransferase, GNAT family (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTB6_LEIAQ rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK71799.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
acetyltransferase
SCNpilot_cont_500_bf_scaffold_1208_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4451..5461)
DNA (1011bp) protein (337aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] rbh
Tryptophan--tRNA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T2T6_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_1208_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5495..6331)
DNA (837bp) protein (279aa)
Putative exodeoxyribonuclease III n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TAQ7_LEIAQ rbh
Putative exodeoxyribonuclease III {ECO:0000313|EMBL:ERK71797.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
exodeoxyribonuclease III rbh
SCNpilot_cont_500_bf_scaffold_1208_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6341..7531)
DNA (1191bp) protein (397aa)
Putative ribonuclease n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSI9_LEIAQ rbh
Putative ribonuclease {ECO:0000313|EMBL:ERK71796.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1208_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7565..8569
DNA (1005bp) protein (335aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R964_LEIAQ rbh
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ERK71795.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative reductase rbh
SCNpilot_cont_500_bf_scaffold_1208_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8655..8972)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T2T2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71793.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
peptidyl-prolyl cis-trans isomerase
SCNpilot_cont_500_bf_scaffold_1208_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9038..9421)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TAQ3_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71792.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1208_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9591..10352)
DNA (762bp) protein (254aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Putative succinate dehydrogenase iron-sulfur subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSI2_LEIAQ rbh
succinate dehydrogenase iron-sulfur subunit rbh
SCNpilot_cont_500_bf_scaffold_1208_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10352..11695)
DNA (1344bp) protein (448aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R959_LEIAQ
SCNpilot_cont_500_bf_scaffold_1208_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12141..12584)
DNA (444bp) protein (148aa)
Succinate dehydrogenase cytochrome b subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTA5_LEIAQ rbh
Succinate dehydrogenase cytochrome b subunit {ECO:0000313|EMBL:ERK71789.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sdhD; succinate dehydrogenase, membrane subunit; K00242 succinate dehydrogenase membrane anchor subunit
SCNpilot_cont_500_bf_scaffold_1208_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12586..13002)
DNA (417bp) protein (139aa)
succinate dehydrogenase n=1 Tax=Humibacter albus RepID=UPI0003B3008B
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:ERK71788.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sdhC; succinate dehydrogenase, cytochrome b-556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
SCNpilot_cont_500_bf_scaffold_1208_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13231..13434
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TAP7_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71787.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1208_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13453..14577)
DNA (1125bp) protein (375aa)
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSH7_LEIAQ rbh
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:ERK71786.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
mannose-1-phosphate guanylyltransferase rbh
SCNpilot_cont_500_bf_scaffold_1208_19
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14665..15834
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037BC0CA rbh
glucosyltransferase rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40661.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1208_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15885..17021
DNA (1137bp) protein (379aa)
Putative magnesium and cobalt transport protein CorA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RXG2_LEIAQ rbh
Putative magnesium and cobalt transport protein CorA {ECO:0000313|EMBL:ERK73426.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
metal ion transport protein rbh
SCNpilot_cont_500_bf_scaffold_1208_21
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17270..18355
DNA (1086bp) protein (362aa)
Surface lipoprotein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PAX6_LEIXC rbh
surface lipoprotein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40663.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1208_22
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18447..19985
DNA (1539bp) protein (513aa)
ABC transporter ATP-binding protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P5C0_LEIXC rbh
ABC transporter ATP-binding protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40664.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1208_23
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19982..21307
DNA (1326bp) protein (442aa)
ABC transporter permease n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P2W4_LEIXC rbh
ABC transporter permease rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40665.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1208_24
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21304..22593
DNA (1290bp) protein (430aa)
ABC transporter permease n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P4H6_LEIXC rbh
ABC transporter permease rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40666.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1208_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22590..23018
DNA (429bp) protein (143aa)
cdd; cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RDU9_LEIAQ
Cytidine deaminase {ECO:0000313|EMBL:ERK73420.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1208_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23015..24322
DNA (1308bp) protein (436aa)
deoA; thymidine phosphorylase (EC:2.4.2.4); K00758 thymidine phosphorylase [EC:2.4.2.4] rbh
Putative pyrimidine-nucleoside phosphorylase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RY21_LEIAQ rbh
Putative pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:ERK73419.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1208_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24354..25472
DNA (1119bp) protein (373aa)
Adenosine deaminase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7H3_LEIAQ rbh
Adenosine deaminase {ECO:0000313|EMBL:ERK73418.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
adenosine deaminase rbh
SCNpilot_cont_500_bf_scaffold_1208_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25497..25955
DNA (459bp) protein (153aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TFE2_LEIAQ
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:ERK73417.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phosphotransferase system mannitol/fructose-specific IIA domain-containing protein
SCNpilot_cont_500_bf_scaffold_1208_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25952..26224
DNA (273bp) protein (91aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RXF1_LEIAQ
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:ERK73416.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phosphotransferase IIB component
SCNpilot_cont_500_bf_scaffold_1208_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26252..26554)
DNA (303bp) protein (101aa)
Toxin-antitoxin system, antitoxin component, ArsR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RDU3_LEIAQ
Toxin-antitoxin system, antitoxin component, ArsR family {ECO:0000313|EMBL:ERK73415.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ArsR family transcriptional regulator
Displaying items 1-30 of 88 in total

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