ggKbase home page

SCNpilot_cont_500_bf_scaffold_1229

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1229_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(242..1657)
DNA (1416bp) protein (472aa)
MATE efflux family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TAH8_LEIAQ rbh
MATE efflux family protein {ECO:0000313|EMBL:ERK71722.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
MATE family efflux protein rbh
SCNpilot_cont_500_bf_scaffold_1229_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1760..2239)
DNA (480bp) protein (160aa)
Transcriptional regulator, MarR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSA8_LEIAQ rbh
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERK71721.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1229_3
Pseudomonas sp. GM50, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2264..3001)
DNA (738bp) protein (246aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Pseudomonas sp. GM50 RepID=J3A9Y0_9PSED
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJM62308.1}; TaxID=1144332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM50.;"
alpha/beta hydrolase
SCNpilot_cont_500_bf_scaffold_1229_4
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3125..4336
DNA (1212bp) protein (404aa)
Type 2 acyl-CoA dehydrogenase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I1T1_PSEUO
Monooxygenase {ECO:0000313|EMBL:KES23581.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
type 2 acyl-CoA dehydrogenase
SCNpilot_cont_500_bf_scaffold_1229_5
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4351..5739
DNA (1389bp) protein (463aa)
nitrilotriacetate monooxygenase family protein (EC:1.14.14.10)
Putative xenobiotic compound monooxygenase, DszA family n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I1D3_PSEUO rbh
N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:ETM64245.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
SCNpilot_cont_500_bf_scaffold_1229_6
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5846..7288
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00035CE002 rbh
Mycobacterium llatzerense strain CLUC14 Mllat_contig000011, whole genome shotgun sequence {ECO:0000313|EMBL:KIU17164.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
amino acid permease rbh
SCNpilot_cont_500_bf_scaffold_1229_7
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7309..7686)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000362CB85
Siderophore-interacting protein {ECO:0000313|EMBL:EYT56256.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1229_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7836..9008)
DNA (1173bp) protein (391aa)
thiolase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] rbh
3-oxoadipyl-CoA thiolase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8Y3_LEIAQ rbh
3-oxoadipyl-CoA thiolase {ECO:0000313|EMBL:ERK71720.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1229_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9066..9677)
DNA (612bp) protein (204aa)
Vitamin K epoxide reductase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT35_LEIAQ rbh
Vitamin K epoxide reductase family protein {ECO:0000313|EMBL:ERK71719.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1229_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9682..9930)
DNA (249bp) protein (83aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2QVA9_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK66855.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1229_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9927..11621)
DNA (1695bp) protein (565aa)
Cytochrome c oxidase subunit 1 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RDB2_LEIAQ rbh
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:ERK66856.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
cytochrome C oxidase subunit I
SCNpilot_cont_500_bf_scaffold_1229_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11741..12388
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SWH0_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK66857.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1229_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12404..13282)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SN60_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK66858.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1229_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13378..15930)
DNA (2553bp) protein (851aa)
MMPL family protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2REA0_LEIAQ rbh
MMPL family protein {ECO:0000313|EMBL:ERK66859.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein; K06994 putative drug exporter of the RND superfamily rbh
SCNpilot_cont_500_bf_scaffold_1229_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16016..16597
DNA (582bp) protein (194aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RYN8_LEIAQ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK73624.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1229_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16716..17381)
DNA (666bp) protein (222aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TG07_LEIAQ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK73627.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1229_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17478..19205
DNA (1728bp) protein (576aa)
Drug resistance MFS transporter, drug:H+ antiporter-2 family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T810_LEIAQ rbh
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:ERK73628.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative multidrug efflux MFS permease,transporter family 2.A.1 rbh
SCNpilot_cont_500_bf_scaffold_1229_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19217..19723
DNA (507bp) protein (169aa)
Transcriptional regulator, MarR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RYP3_LEIAQ rbh
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERK73629.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1229_19
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19737..20864)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000374299D rbh
Uncharacterized protein {ECO:0000313|EMBL:EYT52752.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1229_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20885..22114)
DNA (1230bp) protein (410aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAK0_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK65881.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1229_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22216..22875
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWY0_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK73024.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1229_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22887..23474
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6E4_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK73023.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1229_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23461..23844)
DNA (384bp) protein (128aa)
PHP domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEB4_LEIAQ
PHP domain protein {ECO:0000313|EMBL:ERK73022.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein; K04477 putative hydrolase
SCNpilot_cont_500_bf_scaffold_1229_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23841..24401)
DNA (561bp) protein (187aa)
PHP domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEB4_LEIAQ
PHP domain protein {ECO:0000313|EMBL:ERK73022.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
PHP family phosphohydrolase, histidinol phosphatase; K04477 putative hydrolase
SCNpilot_cont_500_bf_scaffold_1229_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24453..25010
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW95_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK73021.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
dihydrofolate reductase rbh
SCNpilot_cont_500_bf_scaffold_1229_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25125..27119
DNA (1995bp) protein (665aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1]
Acetate--CoA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWX4_LEIAQ rbh
Acetate--CoA ligase {ECO:0000313|EMBL:ERK73019.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1229_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27710..29794)
DNA (2085bp) protein (695aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Glycogen debranching enzyme GlgX n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6E0_LEIAQ rbh
glycogen debranching protein rbh
SCNpilot_cont_500_bf_scaffold_1229_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30016..30267
DNA (252bp) protein (84aa)
Toxin-antitoxin system, toxin component, HicA family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEB1_LEIAQ
Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:ERK73017.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
HicA family toxin-antitoxin system, toxin component
SCNpilot_cont_500_bf_scaffold_1229_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30264..30590
DNA (327bp) protein (109aa)
Toxin-antitoxin system, antitoxin component, HicB family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW91_LEIAQ
Toxin-antitoxin system, antitoxin component, HicB family {ECO:0000313|EMBL:ERK73016.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
HicB family protein
SCNpilot_cont_500_bf_scaffold_1229_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30587..32290)
DNA (1704bp) protein (568aa)
4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCQ5_LEIAQ rbh
4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000313|EMBL:ERK73015.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
malto-oligosyltrehalose trehalohydrolase rbh
Displaying items 1-30 of 45 in total

View Taxonomy