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SCNpilot_cont_500_bf_scaffold_1454

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1454_1
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..745
DNA (744bp) protein (248aa)
Phage integrase family protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JUM1_ARTS2
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ABK02741.1}; Flags: Precursor;; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
SCNpilot_cont_500_bf_scaffold_1454_trna_1
unknown

Not on your lists

807..877
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1454_2
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1681..3390
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R5K2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:KEP76073.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1454_3
unknown

Not on your lists

3387..3968
DNA (582bp) protein (194aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1454_4
unknown

Not on your lists

4006..4563
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1454_5
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4747..5352)
DNA (606bp) protein (202aa)
hypothetical protein; K00358 [EC:1.6.99.-]
NAD(P)H dehydrogenase (Quinone) n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TK25_ACIAC
NAD(P)H dehydrogenase (Quinone) {ECO:0000313|EMBL:ABM31313.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_cont_500_bf_scaffold_1454_6
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5497..5838
DNA (342bp) protein (114aa)
Putative HxlR family transcriptional regulator n=1 Tax=Gordonia terrae NBRC 100016 RepID=H5UCE1_9ACTO
Putative transcriptional regulator, HxlR family {ECO:0000313|EMBL:AHH20547.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
putative transcriptional regulators
SCNpilot_cont_500_bf_scaffold_1454_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5857..6321)
DNA (465bp) protein (155aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RE49_LEIAQ rbh
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:ERK73525.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1454_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6331..6975)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RYE1_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK73524.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1454_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6977..7315)
DNA (339bp) protein (113aa)
Transcriptional regulator, ArsR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7S9_LEIAQ
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERK73523.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1454_10
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7443..7850)
DNA (408bp) protein (136aa)
NUDIX domain protein n=1 Tax=Brevibacterium casei S18 RepID=K9ATW3_9MICO
NUDIX domain protein {ECO:0000313|EMBL:EKU46047.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
NUDIX domain protein
SCNpilot_cont_500_bf_scaffold_1454_11
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7890..9134)
DNA (1245bp) protein (415aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
histidine kinase n=1 Tax=Glaciibacter superstes RepID=UPI0003B7876B
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_1454_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9127..9834)
DNA (708bp) protein (236aa)
Transcriptional regulatory protein CutR n=1 Tax=Streptomyces sp. HPH0547 RepID=S3B4F6_9ACTO
Transcriptional regulatory protein TcrA {ECO:0000313|EMBL:KJL32547.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1454_13
unknown

Not on your lists

9979..10284
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1454_14
unknown

Not on your lists

10351..10449
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1454_15
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10540..11496)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SEN8_ACTS5
CAAX amino terminal protease self-immunity {ECO:0000313|EMBL:KJL18655.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1454_16
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11531..12178)
DNA (648bp) protein (216aa)
LuxR family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI000360A151
Response regulator protein VraR {ECO:0000313|EMBL:KJL18656.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
LuxR family two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1454_17
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12175..13260)
DNA (1086bp) protein (362aa)
Sensor histidine kinase DesK {ECO:0000313|EMBL:KJL18657.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL18657.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
histidine kinase n=1 Tax=Humibacter albus RepID=UPI0003B6E557
putative two-component system, sensor kinase
SCNpilot_cont_500_bf_scaffold_1454_18
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13529..14341
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DCM4_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KJL24482.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1454_19
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14417..14917)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003713A4D
Conserved protein {ECO:0000313|EMBL:CEL16539.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1454_20
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14986..15459
DNA (474bp) protein (158aa)
Transcriptional regulator, MarR family n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q935_STANL
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADD40644.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
SCNpilot_cont_500_bf_scaffold_1454_21
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15499..15945)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI000363F301
MarR family transcriptional regulator {ECO:0000313|EMBL:KIA66780.1}; TaxID=1141657 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
regulatory protein MarR
SCNpilot_cont_500_bf_scaffold_1454_22
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16016..16417
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4UYB5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJY44734.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1454_23
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16564..17781)
DNA (1218bp) protein (406aa)
Putative major facilitator superfamily transporter n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VW49_9ACTO rbh
putative major facilitator superfamily transporter rbh
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:AGZ41054.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_1454_24
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17868..18431
DNA (564bp) protein (188aa)
Regulatory protein TetR n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZD2_9ACTO
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AGZ41055.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_1454_25
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18511..19455)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K2K4_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM73463.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
NAD-dependent epimerase/dehydratase
SCNpilot_cont_500_bf_scaffold_1454_26
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19520..20032
DNA (513bp) protein (171aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VEJ2_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL08052.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1454_27
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20029..20712
DNA (684bp) protein (228aa)
ThiJ/PfpI domain protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SZ32_AMYOR rbh
ThiJ/PfpI domain protein rbh
ThiJ/PfpI domain protein {ECO:0000313|EMBL:AGM08609.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
SCNpilot_cont_500_bf_scaffold_1454_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20725..21042)
DNA (318bp) protein (106aa)
PASTA domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPZ6_LEIAQ
PASTA domain protein {ECO:0000313|EMBL:ERK70649.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1454_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21171..23057
DNA (1887bp) protein (629aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3Q4_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72118.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
Displaying items 1-30 of 48 in total

View Taxonomy