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SCNpilot_cont_500_bf_scaffold_1547

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1547_1
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1173
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003726157
DNA-damage-inducible protein F
Uncharacterized protein {ECO:0000313|EMBL:AGW40375.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1547_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1374..2582)
DNA (1209bp) protein (403aa)
Amidohydrolase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RLJ7_LEIAQ rbh
Amidohydrolase {ECO:0000313|EMBL:ERK69429.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
penicillin binding protein transpeptidase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1547_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2781..3851)
DNA (1071bp) protein (357aa)
Sugar-binding domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SVV9_LEIAQ rbh
Sugar-binding domain protein {ECO:0000313|EMBL:ERK69428.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
LacI family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_1547_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3938..5191
DNA (1254bp) protein (418aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3Y8_LEIAQ rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK69427.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_1547_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5461..6507)
DNA (1047bp) protein (349aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZ51_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70503.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
secreted protein rbh
SCNpilot_cont_500_bf_scaffold_1547_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6546..7241
DNA (696bp) protein (232aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Endonuclease NucS n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPL2_LEIAQ rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1547_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7241..7663
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R5J2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70505.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1547_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7701..8381
DNA (681bp) protein (227aa)
Putative phosphoglycolate phosphatase, bacterial n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNV6_LEIAQ rbh
Putative phosphoglycolate phosphatase, bacterial {ECO:0000313|EMBL:ERK70506.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
HAD superfamily hydrolase rbh
SCNpilot_cont_500_bf_scaffold_1547_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8462..10336)
DNA (1875bp) protein (625aa)
PRD domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZ54_LEIAQ rbh
PRD domain protein {ECO:0000313|EMBL:ERK70508.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
BigG family transcription antiterminator; K03491 lichenan operon transcriptional antiterminator rbh
SCNpilot_cont_500_bf_scaffold_1547_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10531..10839
DNA (309bp) protein (103aa)
PTS system, IIB component; K02760 PTS system, cellobiose-specific IIB component [EC:2.7.1.69]
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SWE0_LEIAQ
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:ERK69593.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1547_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10897..11163
DNA (267bp) protein (89aa)
Phosphocarrier, HPr family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RM07_LEIAQ
Phosphocarrier, HPr family {ECO:0000313|EMBL:ERK69594.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phosphocarrier protein HPr
SCNpilot_cont_500_bf_scaffold_1547_12
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11166..12770
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
PTS system, enzyme I n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P4M2_LEIXC rbh
PTS system, enzyme I rbh
SCNpilot_cont_500_bf_scaffold_1547_13
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12810..14336
DNA (1527bp) protein (509aa)
EIIBC-Mtl; PTS system, mannitol-specific IIBC component; K02799 PTS system, mannitol-specific IIB component [EC:2.7.1.69]; K02800 PTS system, mannitol-specific IIC component rbh
PTS mannitol transporter subunit IIB n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037A84FE rbh
PTS system, mannitol-specific IIBC component {ECO:0000313|EMBL:AAT88170.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_500_bf_scaffold_1547_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14333..14770
DNA (438bp) protein (146aa)
Putative mannitol-specific phosphotransferase enzyme IIA component n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP31_LEIAQ
Putative mannitol-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:ERK70339.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
PTS system, mannitol-specific enzyme II, A component
SCNpilot_cont_500_bf_scaffold_1547_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14784..15935
DNA (1152bp) protein (384aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SYL8_LEIAQ rbh
mannitol-1-phosphate 5-dehydrogenase
SCNpilot_cont_500_bf_scaffold_1547_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15952..16515)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6J4_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70337.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein; K07002
SCNpilot_cont_500_bf_scaffold_1547_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16500..17549)
DNA (1050bp) protein (350aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81); K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
N-acyl-D-aspartate deacylase domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R4Z8_LEIAQ
N-acyl-D-aspartate deacylase domain protein {ECO:0000313|EMBL:ERK70335.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1547_18
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17968..18591)
DNA (624bp) protein (208aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003614D57 rbh
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:KJR04914.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
SCNpilot_cont_500_bf_scaffold_1547_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18604..19851)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000369152F rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK69916.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
D-amino acid deaminase rbh
SCNpilot_cont_500_bf_scaffold_1547_20
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20044..21051
DNA (1008bp) protein (336aa)
2-dehydro-3-deoxygluconokinase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PA66_LEIXC rbh
2-dehydro-3-deoxygluconokinase rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40348.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1547_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21048..21854
DNA (807bp) protein (269aa)
Pectin degradation repressor protein KdgR family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R225_LEIAQ rbh
Pectin degradation repressor protein KdgR family protein {ECO:0000313|EMBL:ERK69325.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
IclR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_1547_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21851..22255
DNA (405bp) protein (135aa)
Putative endoribonuclease L-PSP n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RKA1_LEIAQ
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:ERK69326.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
protein synthesis inhibitor
SCNpilot_cont_500_bf_scaffold_1547_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22399..23517
DNA (1119bp) protein (373aa)
Chalcone and stilbene synthase domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3M2_LEIAQ rbh
Chalcone and stilbene synthase domain protein {ECO:0000313|EMBL:ERK69327.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
chalcone and stilbene synthase domain protein rbh
SCNpilot_cont_500_bf_scaffold_1547_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23548..24072
DNA (525bp) protein (175aa)
Isoprenylcysteine carboxyl methyltransferase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R1S6_LEIAQ rbh
Isoprenylcysteine carboxyl methyltransferase family protein {ECO:0000313|EMBL:ERK69235.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
serine O-acetyltransferase rbh
SCNpilot_cont_500_bf_scaffold_1547_25
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24069..25112
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037A7526 rbh
oxidoreductase rbh
Oxidoreductase {ECO:0000313|EMBL:AAT88157.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_500_bf_scaffold_1547_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25213..25542
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQ92_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70759.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1547_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25621..25986)
DNA (366bp) protein (122aa)
META domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPI5_LEIAQ
META domain protein {ECO:0000313|EMBL:ERK70761.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1547_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26123..27919)
DNA (1797bp) protein (599aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00037CF971 rbh
LPXTG-motif protein cell wall anchor domain protein {ECO:0000313|EMBL:ERK70762.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
LPXTG-motif-containing cell wall anchor protein
SCNpilot_cont_500_bf_scaffold_1547_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28000..28992)
DNA (993bp) protein (331aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUR9_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72496.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1547_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29080..30273)
DNA (1194bp) protein (398aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RB92_LEIAQ rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK72495.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
major facilitator superfamily protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter rbh
Displaying items 1-30 of 42 in total

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