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SCNpilot_cont_500_bf_scaffold_1592

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1592_1
Gordonia hirsuta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..221
DNA (219bp) protein (73aa)
Putative methionine gamma-lyase n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7LA74_9ACTO
Putative methionine gamma-lyase {ECO:0000313|EMBL:GAC57651.1}; TaxID=1121927 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
Cystathionine beta-lyase/cystathionine gamma-synthase
SCNpilot_cont_500_bf_scaffold_1592_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

323..919
DNA (597bp) protein (199aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSS7_LEIAQ rbh
ATP-dependent Clp protease proteolytic subunit rbh
SCNpilot_cont_500_bf_scaffold_1592_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1152..1544
DNA (393bp) protein (131aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
clpP; ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8M0_LEIAQ
SCNpilot_cont_500_bf_scaffold_1592_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1726..3000
DNA (1275bp) protein (425aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRZ2_LEIAQ rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX rbh
SCNpilot_cont_500_bf_scaffold_1592_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3020..4327)
DNA (1308bp) protein (436aa)
Chloride transporter, ClC family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TA68_LEIAQ rbh
Chloride transporter, ClC family {ECO:0000313|EMBL:ERK71602.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative chloride channel rbh
SCNpilot_cont_500_bf_scaffold_1592_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4446..6482)
DNA (2037bp) protein (679aa)
Putative peptidyl-dipeptidase dcp n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T298_LEIAQ rbh
Putative peptidyl-dipeptidase dcp {ECO:0000313|EMBL:ERK71603.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1592_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6604..7242
DNA (639bp) protein (213aa)
Transcriptional regulator, ArsR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8M4_LEIAQ rbh
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERK71605.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1592_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7239..8537
DNA (1299bp) protein (433aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRZ6_LEIAQ rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK71606.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Major facilitator superfamily Permease
SCNpilot_cont_500_bf_scaffold_1592_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8534..8719
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TA72_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71607.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transaldolase
SCNpilot_cont_500_bf_scaffold_1592_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8738..9004)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T2A3_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71608.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1592_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9004..9465)
DNA (462bp) protein (154aa)
Acetyltransferase, GNAT family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RST7_LEIAQ
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK71609.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
acetyltransferase
SCNpilot_cont_500_bf_scaffold_1592_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9538..9984)
DNA (447bp) protein (149aa)
Acetyltransferase, GNAT family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8M8_LEIAQ
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK71610.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
acetyltransferase
SCNpilot_cont_500_bf_scaffold_1592_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9981..12590)
DNA (2610bp) protein (870aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Valine--tRNA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RS00_LEIAQ rbh
valyl-tRNA synthetase rbh
SCNpilot_cont_500_bf_scaffold_1592_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12681..14003)
DNA (1323bp) protein (441aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TA75_LEIAQ rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK71612.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
proline/betaine transporter rbh
SCNpilot_cont_500_bf_scaffold_1592_15
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14069..14683
DNA (615bp) protein (205aa)
TetR family transcriptional regulator n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PDF6_LEIXC
TetR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AGW41573.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1592_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14907..18245
DNA (3339bp) protein (1113aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] rbh
Isoleucine--tRNA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPC0_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_1592_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18242..19618
DNA (1377bp) protein (459aa)
Protein FolC n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R577_LEIAQ rbh
Protein FolC {ECO:0000313|EMBL:ERK70410.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
folylpolyglutamate synthase rbh
SCNpilot_cont_500_bf_scaffold_1592_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19597..20052
DNA (456bp) protein (152aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SYF9_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK67512.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1592_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20049..20471
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}; EC=2.7.4.6 {ECO:0000256|RuleBase:RU004013};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RFA5_LEIAQ
SCNpilot_cont_500_bf_scaffold_1592_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20544..21143)
DNA (600bp) protein (200aa)
Vitamin K epoxide reductase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T0X1_LEIAQ rbh
Vitamin K epoxide reductase family protein {ECO:0000313|EMBL:ERK71143.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1592_21
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21446..23995
DNA (2550bp) protein (850aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036ECF22 rbh
ribonuclease G rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW41567.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1592_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24043..24318)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RBE8_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72565.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1592_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


24582..24890
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Glaciibacter superstes RepID=UPI0003B6B126
50S ribosomal protein L21 {ECO:0000256|RuleBase:RU000562, ECO:0000256|SAAS:SAAS00030282}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
SCNpilot_cont_500_bf_scaffold_1592_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


24921..25178
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T510_LEIAQ
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
SCNpilot_cont_500_bf_scaffold_1592_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25261..26817
DNA (1557bp) protein (519aa)
GTPase Obg n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCY2_LEIAQ rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
GTPase ObgE rbh
SCNpilot_cont_500_bf_scaffold_1592_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26814..27656
DNA (843bp) protein (281aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
proB; gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] rbh
Glutamate 5-kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RBE4_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_1592_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27666..28934
DNA (1269bp) protein (423aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;
proA; gamma-glutamylphosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] rbh
Gamma-glutamyl phosphate reductase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVK3_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_1592_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28989..29225
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T506_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72558.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1592_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29237..29842
DNA (606bp) protein (202aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] rbh
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCX7_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_1592_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29839..31182
DNA (1344bp) protein (448aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNX4_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70289.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
Displaying items 1-30 of 56 in total

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