ggKbase home page

SCNpilot_cont_500_bf_scaffold_1754

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1754_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..799
DNA (798bp) protein (266aa)
exopolyphosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx/GppA phosphatase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T686_LEIAQ rbh
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:ERK70227.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1754_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

969..1244
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNS2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70229.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1754_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1278..1964)
DNA (687bp) protein (229aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R4N9_LEIAQ rbh
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ERK70230.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative short chain dehydrogenase/oxidoreductase
SCNpilot_cont_500_bf_scaffold_1754_4
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2083..4389)
DNA (2307bp) protein (769aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EPR76640.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EPR76640.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B546BB
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1754_trna_2
unknown

Not on your lists

comp(4600..4671)
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1754_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4730..5683)
DNA (954bp) protein (318aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SY97_LEIAQ rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERK70233.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_1754_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5693..7210)
DNA (1518bp) protein (506aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Glutamate--tRNA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNS7_LEIAQ rbh
glutamyl-tRNA synthetase rbh
SCNpilot_cont_500_bf_scaffold_1754_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7252..8019)
DNA (768bp) protein (256aa)
FAH family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R4P4_LEIAQ rbh
FAH family protein {ECO:0000313|EMBL:ERK70235.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
5-oxo-1,2,5-tricarboxylic-3-penten acid decarboxilase rbh
SCNpilot_cont_500_bf_scaffold_1754_8
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8021..8890)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036BDA90 rbh
oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:AGW41865.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1754_9
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8887..9831)
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B56600 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KFF59872.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1754_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9913..10845
DNA (933bp) protein (311aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RL48_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK69596.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1754_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10979..12112)
DNA (1134bp) protein (378aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] rbh
Branched-chain-amino-acid transaminase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R6S7_LEIAQ rbh
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:ERK70935.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1754_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12151..13206)
DNA (1056bp) protein (352aa)
3-isopropylmalate dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQT0_LEIAQ rbh
Putative 3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:ERK70934.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
3-isopropylmalate dehydrogenase
SCNpilot_cont_500_bf_scaffold_1754_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13280..14812)
DNA (1533bp) protein (511aa)
Putative ATP synthase F0, A subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T0C0_LEIAQ rbh
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:ERK70933.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative efflux MFS permease; K08167 MFS transporter, DHA2 family, methyl viologen resistance protein SmvA rbh
SCNpilot_cont_500_bf_scaffold_1754_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14865..15425
DNA (561bp) protein (187aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T8A5_LEIAQ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK70932.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1754_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15477..16724)
DNA (1248bp) protein (416aa)
RNA polymerase subunit sigma-24 n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B34195 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK97564.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_1754_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16759..17124)
DNA (366bp) protein (122aa)
DGPF domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPR8_LEIAQ
DGPF domain protein {ECO:0000313|EMBL:ERK70836.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1754_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17260..18354)
DNA (1095bp) protein (365aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
Phosphoglycerate dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R6G7_LEIAQ
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ERK70835.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1754_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18934..19323
DNA (390bp) protein (130aa)
DoxX family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQG3_LEIAQ
DoxX family protein {ECO:0000313|EMBL:ERK70834.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1754_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19334..20071)
DNA (738bp) protein (246aa)
Putative copper homeostasis protein CutC (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8D1_LEIAQ rbh
Putative copper homeostasis protein CutC {ECO:0000313|EMBL:ERK71485.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1754_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20185..20841)
DNA (657bp) protein (219aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Ketol-acid reductoisomerase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRN7_LEIAQ
ketol-acid reductoisomerase
SCNpilot_cont_500_bf_scaffold_1754_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21200..21712)
DNA (513bp) protein (171aa)
Acetolactate synthase, small subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9W2_LEIAQ rbh
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ERK71487.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
acetolactate synthase 3 regulatory subunit rbh
SCNpilot_cont_500_bf_scaffold_1754_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21718..23526)
DNA (1809bp) protein (603aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Acetolactate synthase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T204_LEIAQ rbh
acetolactate synthase 1 catalytic subunit rbh
SCNpilot_cont_500_bf_scaffold_1754_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23752..25242)
DNA (1491bp) protein (497aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Dihydroxy-acid dehydratase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSH4_LEIAQ
dihydroxy-acid dehydratase
SCNpilot_cont_500_bf_scaffold_1754_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25317..26120)
DNA (804bp) protein (268aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Trehalose-phosphatase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8D6_LEIAQ rbh
trehalose-phosphatase protein
SCNpilot_cont_500_bf_scaffold_1754_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26117..27517)
DNA (1401bp) protein (467aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRP1_LEIAQ
trehalose-6-phosphate synthase
SCNpilot_cont_500_bf_scaffold_1754_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27743..28540
DNA (798bp) protein (266aa)
AP endonuclease, family 2 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9W7_LEIAQ rbh
AP endonuclease, family 2 {ECO:0000313|EMBL:ERK71492.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar phosphate isomerase/epimerase rbh
SCNpilot_cont_500_bf_scaffold_1754_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28561..29430)
DNA (870bp) protein (290aa)
Putative triacylglycerol lipase (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2QE37_LEIAQ rbh
Putative triacylglycerol lipase {ECO:0000313|EMBL:ERK61130.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
secreted hydrolase rbh
SCNpilot_cont_500_bf_scaffold_1754_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29466..30137)
DNA (672bp) protein (224aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SV68_LEIAQ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK69208.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1754_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30265..31458
DNA (1194bp) protein (398aa)
MMPL family protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T395_LEIAQ rbh
MMPL family protein {ECO:0000313|EMBL:ERK69207.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
drug exporters of the RND superfamily; K06994 putative drug exporter of the RND superfamily
Displaying items 1-30 of 50 in total

View Taxonomy