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SCNpilot_cont_500_bf_scaffold_1866

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1866_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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34..1320
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3H2_LEIAQ rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK72013.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
major facilitator transporter rbh
SCNpilot_cont_500_bf_scaffold_1866_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1343..2311
DNA (969bp) protein (323aa)
urh; uridine nucleosidase (EC:3.2.2.3) rbh
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RU04_LEIAQ rbh
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:ERK72014.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1866_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2305..3270
DNA (966bp) protein (322aa)
Uncharacterized protein {ECO:0000313|EMBL:KHK96585.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
adenosine deaminase id=7720783 bin=CNBR_ACT species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACT organism_group=Actinobacteria
adenosine deaminase
SCNpilot_cont_500_bf_scaffold_1866_4
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3490..4068
DNA (579bp) protein (193aa)
Sigma-70 region 2 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SDK9_9ACTO
Sigma-70 region 2 {ECO:0000313|EMBL:EFQ82586.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_1866_5
unknown

Not on your lists

4076..4579
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1866_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4625..5467)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9I4_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK71357.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1866_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5562..7307)
DNA (1746bp) protein (582aa)
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
CoA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RR98_LEIAQ rbh
CoA ligase {ECO:0000313|EMBL:ERK71356.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1866_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7353..8159)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R7Y6_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK71355.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1866_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8402..9010)
DNA (609bp) protein (203aa)
Response regulator receiver domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RS15_LEIAQ rbh
Response regulator receiver domain protein {ECO:0000313|EMBL:ERK71354.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
two-component system response regulator
SCNpilot_cont_500_bf_scaffold_1866_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9007..10035)
DNA (1029bp) protein (343aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T1I4_LEIAQ rbh
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERK71353.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
two-component system histidine kinase
SCNpilot_cont_500_bf_scaffold_1866_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10047..10859)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003720F86 rbh
Prenyltransferase, UbiA family {ECO:0000313|EMBL:ERK71410.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ubiA; homogenitisate phytyltransferase
SCNpilot_cont_500_bf_scaffold_1866_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11010..11792)
DNA (783bp) protein (261aa)
trans-aconitate methyltransferase; K00598 trans-aconitate 2-methyltransferase [EC:2.1.1.144]
Methyltransferase domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RS78_LEIAQ rbh
Methyltransferase domain protein {ECO:0000313|EMBL:ERK71409.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1866_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11953..12975
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRF5_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK71406.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
alpha/beta superfamily hydrolase/acyltransferase
SCNpilot_cont_500_bf_scaffold_1866_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13321..14100
DNA (780bp) protein (260aa)
NlpC/P60 family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RS72_LEIAQ rbh
NlpC/P60 family protein {ECO:0000313|EMBL:ERK71404.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1866_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14135..14413
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T1P5_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71403.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1866_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14501..14959
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9N3_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71402.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1866_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15147..16277
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRF0_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK71401.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1866_18
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16415..18400
DNA (1986bp) protein (662aa)
Major facilitator superfamily permease n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LEV9_9ACTO rbh
major facilitator superfamily permease rbh
Major facilitator superfamily permease {ECO:0000313|EMBL:AGL16898.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_500_bf_scaffold_1866_19
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18457..19296
DNA (840bp) protein (280aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XGJ6_9PSEU
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EHR60535.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
Transcriptional regulator, AraC family
SCNpilot_cont_500_bf_scaffold_1866_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19394..20293)
DNA (900bp) protein (300aa)
Phosphogluconate dehydrogenase, NAD binding domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RKR7_LEIAQ rbh
Phosphogluconate dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:ERK69169.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
NADP oxidoreductase, coenzyme F420-dependent:6-phosphogluconate dehydrogenase, NAD-binding protein
SCNpilot_cont_500_bf_scaffold_1866_21
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20388..21293
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A1I1_CELGA
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI12865.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_1866_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21394..24882)
DNA (3489bp) protein (1163aa)
LPXTG-motif protein cell wall anchor domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8Y9_LEIAQ rbh
LPXTG-motif protein cell wall anchor domain protein {ECO:0000313|EMBL:ERK71725.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1866_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25308..26105
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT39_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK71724.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1866_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26210..26932
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T2K3_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK71723.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
Displaying 24 items

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