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SCNpilot_cont_500_bf_scaffold_3057

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3057_1
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..1245
DNA (1245bp) protein (415aa)
FAD/FMN-containing dehydrogenase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P584_LEIXC
FAD/FMN-containing dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AGW40911.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_3057_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1196..2089)
DNA (894bp) protein (298aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
thiosulfate sulfurtransferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B68D53
Rhodanese-like protein {ECO:0000313|EMBL:ERK71477.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_3057_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2818..4203)
DNA (1386bp) protein (462aa)
L-serine ammonia-lyase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T1Z5_LEIAQ rbh
L-serine ammonia-lyase {ECO:0000313|EMBL:ERK71478.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hydrolase rbh
SCNpilot_cont_500_bf_scaffold_3057_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4419..5438
DNA (1020bp) protein (340aa)
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSG3_LEIAQ rbh
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA {ECO:0000313|EMBL:ERK71479.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
daunorubicin resistance ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_3057_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5435..6253
DNA (819bp) protein (273aa)
Putative ABC transporter n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8C9_LEIAQ rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
antibiotic export permease; K09686 antibiotic transport system permease protein
SCNpilot_cont_500_bf_scaffold_3057_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6399..7094)
DNA (696bp) protein (232aa)
Bacterial transcriptional activator domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R4I7_LEIAQ
Bacterial transcriptional activator domain protein {ECO:0000313|EMBL:ERK70175.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_3057_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7049..9631)
DNA (2583bp) protein (861aa)
Bacterial transcriptional activator domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R4I7_LEIAQ rbh
Bacterial transcriptional activator domain protein {ECO:0000313|EMBL:ERK70175.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3057_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9692..10273
DNA (582bp) protein (194aa)
Methyltransferase domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9J5_LEIAQ rbh
Methyltransferase domain protein {ECO:0000313|EMBL:ERK71920.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
type 12 methyltransferase
SCNpilot_cont_500_bf_scaffold_3057_9
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10381..10626
DNA (246bp) protein (82aa)
Putative transcriptional regulator, CopG family n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XAT2_9MICO
CopG family transcriptional regulator {ECO:0000313|EMBL:KJC64626.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
CopG family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3057_10
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10623..10967
DNA (345bp) protein (115aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
putative growth inhibitor; K07171 mRNA interferase [EC:3.1.-.-]
mRNA interferase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CP53_CLAM3
SCNpilot_cont_500_bf_scaffold_3057_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11090..11662)
DNA (573bp) protein (191aa)
CoA binding domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSY1_LEIAQ rbh
CoA binding domain protein {ECO:0000313|EMBL:ERK71921.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3057_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11665..12957)
DNA (1293bp) protein (431aa)
putative O-acetylhomoserine (thiol)-lyase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] rbh
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TB45_LEIAQ rbh
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ERK71922.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_3057_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13138..13455
DNA (318bp) protein (106aa)
Multidrug resistance protein, SMR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T373_LEIAQ
Multidrug resistance protein, SMR family {ECO:0000313|EMBL:ERK71923.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
membrane transporters of cations and cationic drugs; K11741 quaternary ammonium compound-resistance protein SugE
SCNpilot_cont_500_bf_scaffold_3057_14
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13497..15113)
DNA (1617bp) protein (539aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000362C9B6 rbh
Peptidase S53 {ECO:0000313|EMBL:AJT42993.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
kumamolisin rbh
SCNpilot_cont_500_bf_scaffold_3057_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15174..16787)
DNA (1614bp) protein (538aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R446_LEIAQ rbh
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:ERK70020.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3057_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16851..17672
DNA (822bp) protein (274aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMF8_LEIAQ rbh
tetrapyrrole methylase rbh
SCNpilot_cont_500_bf_scaffold_3057_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17708..18271)
DNA (564bp) protein (188aa)
Riboflavin biosynthesis protein RibD protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5P8_LEIAQ rbh
Riboflavin biosynthesis protein RibD protein {ECO:0000313|EMBL:ERK70022.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3057_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18396..18755
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SXR6_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70023.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
Displaying 18 items

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