ggKbase home page

SCNpilot_cont_500_bf_scaffold_3435

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3435_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..417)
DNA (417bp) protein (139aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Endoribonuclease YbeY n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T518_LEIAQ
metalloprotease
SCNpilot_cont_500_bf_scaffold_3435_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(425..1498)
DNA (1074bp) protein (358aa)
PhoH-like protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVL8_LEIAQ rbh
PhoH-like protein {ECO:0000313|EMBL:ERK72574.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phosphate starvation-induced protein rbh
SCNpilot_cont_500_bf_scaffold_3435_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1506..1868)
DNA (363bp) protein (121aa)
Histidine triad domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RBF8_LEIAQ
Histidine triad domain protein {ECO:0000313|EMBL:ERK72575.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3435_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1901..2629)
DNA (729bp) protein (243aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] rbh
Ribosomal RNA small subunit methyltransferase E (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SV82_LEIAQ rbh
RNA methyltransferase, RsmE family {ECO:0000313|EMBL:ERK69223.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_3435_5
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2634..3749)
DNA (1116bp) protein (372aa)
molecular chaperone DnaJ n=1 Tax=Microbacteriaceae RepID=UPI0003633B38 rbh
DnaJ protein rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_3435_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3781..4800)
DNA (1020bp) protein (340aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUW6_LEIAQ rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
heat-inducible transcription repressor rbh
SCNpilot_cont_500_bf_scaffold_3435_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4973..5485
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RBD8_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72550.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein; K09940 hypothetical protein
SCNpilot_cont_500_bf_scaffold_3435_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5609..5989
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVJ5_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72549.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3435_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5999..7228)
DNA (1230bp) protein (410aa)
hemN; coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T500_LEIAQ rbh
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ERK72548.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_3435_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7228..7875)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCW9_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72547.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3435_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7995..8612
DNA (618bp) protein (206aa)
Riboflavin biosynthesis protein RibD protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUW2_LEIAQ rbh
Riboflavin biosynthesis protein RibD protein {ECO:0000313|EMBL:ERK72546.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SC10F4.34; hypothetical protein
SCNpilot_cont_500_bf_scaffold_3435_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8619..10388)
DNA (1770bp) protein (590aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Elongation factor 4 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RBD3_LEIAQ rbh
GTP-binding protein LepA rbh
Displaying 12 items

View Taxonomy