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SCNpilot_cont_500_bf_scaffold_1222_1

Organism: SCNPILOT_CONT_500_P_Leifsonia_70_8_8

partial RP 35 / 55 MC: 1 BSCG 36 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(3..656)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 218.0
  • Bit_score: 411
  • Evalue 9.50e-112
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacteriaceae RepID=UPI000369D6E8 similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 218.0
  • Bit_score: 420
  • Evalue 1.50e-114
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 218.0
  • Bit_score: 411
  • Evalue 2.10e-112

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Taxonomy

Leifsonia xyli → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
TTGGCTGCTGCGCGCAACGCAACCAACACTGACAAGACACCCAAGAACGGACGAGGCGCATCCCGTCTCTCGTTCGCCAAGATCACGGACACCCTGACGGTTCCCGATCTGCTCGCTTTGCAGACCGAGAGCTTCGACTGGCTGGTCGGCAACGACGCGTGGAAGGCCCGCGTCGCCGAAGCCGAGGCCCAGGGTCGCCAGGATCTGCCCGGTAGCACCGGCCTCGAGGAGATCTTCGAGGAGATCTCTCCCATCGAGGACCTCGGCGAGACCATGCAGCTCTCGTTCACGAACCCGTTCCTCGAGGAGAAGAAGTACTCGATCGACGAGTGCAAGGAGAAGGGCAAGACCTACGCCGCCCCGCTCTACGTCGAGGCCGAGTTCATGAACCACCTCACCGGTGAGATCAAGACTCAGACCGTCTTCATGGGCGACTTCCCGCTCATGACGGAGCGAAGCACCTGCATCATCAACGGCACCGAGCGTGTCGTCGTGTCGCAGCTCGTCCGCTCGCCGGGCGTCTACTTCGAGGCCACGGCCGACAAGACCAGCGACAAGGACATCTACTCGGCGCGCATCATCCCGAGCCGCGGTGCGTGGCTCGAGTTCGAGATCGACAAGCGCGACCAGGTGGGCGTGCGCATCGACCGCAAG
PROTEIN sequence
Length: 218
LAAARNATNTDKTPKNGRGASRLSFAKITDTLTVPDLLALQTESFDWLVGNDAWKARVAEAEAQGRQDLPGSTGLEEIFEEISPIEDLGETMQLSFTNPFLEEKKYSIDECKEKGKTYAAPLYVEAEFMNHLTGEIKTQTVFMGDFPLMTERSTCIINGTERVVVSQLVRSPGVYFEATADKTSDKDIYSARIIPSRGAWLEFEIDKRDQVGVRIDRK