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SCNpilot_cont_500_bf_scaffold_1222

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1222_1
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..656)
DNA (654bp) protein (218aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacteriaceae RepID=UPI000369D6E8
DNA-directed RNA polymerase subunit beta
SCNpilot_cont_500_bf_scaffold_1222_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(977..2005)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036C048E rbh
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ERK61062.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
nucleoside-diphosphate-sugar epimerase
SCNpilot_cont_500_bf_scaffold_1222_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2069..2758)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036277D4 rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KHK99539.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
SCNpilot_cont_500_bf_scaffold_1222_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2755..3912)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000362FFD1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK68489.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_1222_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3920..4438)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2QZX6_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK68490.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1222_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4575..5441
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNJ7_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70406.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1222_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5464..6342)
DNA (879bp) protein (293aa)
Allophanate hydrolase subunit 2 (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R572_LEIAQ rbh
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:ERK70405.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1222_8
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6339..6956)
DNA (618bp) protein (206aa)
allophanate hydrolase subunit (EC:3.5.1.54)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000364354C
Uncharacterized protein {ECO:0000313|EMBL:CAQ02647.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
SCNpilot_cont_500_bf_scaffold_1222_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6953..7714)
DNA (762bp) protein (254aa)
UPF0271 protein N136_01734 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTN1_LEIAQ rbh
UPF0271 protein N136_01734 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative lactam utilization protein; K07160 UPF0271 protein
SCNpilot_cont_500_bf_scaffold_1222_10
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7719..8333)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6ACX3_LEIXX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAT89771.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_500_bf_scaffold_1222_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8422..9030
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00036DBD49
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK69418.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ribosomal-protein-alanine N-acetyltransferase
SCNpilot_cont_500_bf_scaffold_1222_12
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9051..9572)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00036256CE rbh
hypothetical protein rbh
Phage-related protein {ECO:0000313|EMBL:AAT89772.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_500_bf_scaffold_1222_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9687..10103)
DNA (417bp) protein (139aa)
Tetratricopeptide repeat protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUV2_LEIAQ
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERK72324.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1222_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10214..11395)
DNA (1182bp) protein (394aa)
Glucose/Sorbosone dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAQ3_LEIAQ rbh
Glucose/Sorbosone dehydrogenase {ECO:0000313|EMBL:ERK72325.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_1222_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11417..11719)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2QYB3_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK67920.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-alanyl ligase
SCNpilot_cont_500_bf_scaffold_1222_16
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11803..12405)
DNA (603bp) protein (201aa)
2-phosphosulfolactate phosphatase {ECO:0000256|SAAS:SAAS00085834}; EC=3.1.3.71 {ECO:0000256|SAAS:SAAS00085834};; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036F1E06
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1222_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12402..12899)
DNA (498bp) protein (166aa)
UPF0310 protein N136_03446 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T683_LEIAQ rbh
UPF0310 protein N136_03446 {ECO:0000256|HAMAP-Rule:MF_00771}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1222_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13008..13568
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMZ3_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70221.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
carbamoylphosphate synthase, large chain
SCNpilot_cont_500_bf_scaffold_1222_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13565..14260
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R4M9_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70220.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein; K09164 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1222_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14280..16499)
DNA (2220bp) protein (740aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNR1_LEIAQ rbh
ATP-dependent DNA helicase rbh
SCNpilot_cont_500_bf_scaffold_1222_21
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16757..18430
DNA (1674bp) protein (558aa)
ATP-dependent RNA helicase n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6ACW5_LEIXX rbh
rhlE; ATP-dependent RNA helicase rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:AAT89778.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_500_bf_scaffold_1222_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18540..19151)
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SVE9_LEIAQ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK69288.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1222_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19144..20001)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036A3487 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK69289.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_500_bf_scaffold_1222_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20130..21023)
DNA (894bp) protein (298aa)
short-chain dehydrogenase (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T609_LEIAQ rbh
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ERK70142.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_1222_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21083..21742
DNA (660bp) protein (220aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R2N6_LEIAQ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK69510.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1222_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21764..22348)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RLT4_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK69509.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1222_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22455..23114
DNA (660bp) protein (220aa)
Phospholipase/carboxylesterase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SW64_LEIAQ rbh
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ERK69508.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1222_28
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23401..28032
DNA (4632bp) protein (1544aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000377205A rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40595.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
ATP-dependent RNA helicase rbh
SCNpilot_cont_500_bf_scaffold_1222_29
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28144..28920
DNA (777bp) protein (259aa)
DNA glycosylase n=1 Tax=Leifsonia sp. 109 RepID=UPI0003821212 rbh
DNA glycosylase rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40594.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_1222_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29016..29612)
DNA (597bp) protein (199aa)
Flavin reductase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TAW5_LEIAQ rbh
Flavin reductase {ECO:0000313|EMBL:ERK71852.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCAH10.16; reductase
Displaying items 1-30 of 58 in total

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