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SCNpilot_cont_500_bf_scaffold_1222_38

Organism: SCNPILOT_CONT_500_P_Leifsonia_70_8_8

partial RP 35 / 55 MC: 1 BSCG 36 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(35539..36183)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6ACV8_LEIXX similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 208.0
  • Bit_score: 264
  • Evalue 7.80e-68
tetR; TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 208.0
  • Bit_score: 264
  • Evalue 2.40e-68
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AAT89785.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 208.0
  • Bit_score: 264
  • Evalue 1.10e-67

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Taxonomy

Leifsonia xyli → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGAGCGGGATCGAAAGCGGACGCAGGCACACACGCGACGATGTGGCGCGCACGGCGCTGCGCATCCTCGACGACCACGGCCTGCCCGATCTCACGATGCGCCGGCTCGCCGCTGCGCTCGACGTGCAGCCGAGCGCCCTCTACTGGCACTTCCCGAACAAGCAGTCCCTGCTCGCCGAGCTCGCCGACCGCATCGTCGCCGGCCCCGCCGCCCCTCCCGCACCGGACGACGAGTGGACGGACGCCCTCCGCACCGAGGCCGCCGCCCTCCGCGACGCCCTGCTCGCCTACCGCGACGGCGCGGAGGTCGTGGCGAGCACCCTCGCGCTCGGGCTCGGCTCCGGAGTCGCCCTCGACCGCCTGGCGGGCGCGGTCACCCGGGGCGGCTTCGACGAGGCGACCGCCCGGCGTGCCGCGACCGCACTGCTGCACTTCGTGCTCGGCCACGTCTCGCACGAGCAGCAGCGCCTGCAGTACGACAGCCTCGGGGTGCTGGCGGATCCCACGGATCCCGTCGCCGCCGGGGCCGACGGCGGCTCCGGGCGAGCGGACGATCCCGCGACCGATTTCGCCTTCGGCGTCGACCTCTTCGCCGGCGGCCTCGAGCTCCTCCGGACAGGGGAACTCAGTCGCCCCCGAAGGTGA
PROTEIN sequence
Length: 215
VSGIESGRRHTRDDVARTALRILDDHGLPDLTMRRLAAALDVQPSALYWHFPNKQSLLAELADRIVAGPAAPPAPDDEWTDALRTEAAALRDALLAYRDGAEVVASTLALGLGSGVALDRLAGAVTRGGFDEATARRAATALLHFVLGHVSHEQQRLQYDSLGVLADPTDPVAAGADGGSGRADDPATDFAFGVDLFAGGLELLRTGELSRPRR*