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SCNpilot_cont_500_bf_scaffold_3993_7

Organism: SCNPILOT_CONT_500_P_Leifsonia_70_8_8

partial RP 35 / 55 MC: 1 BSCG 36 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 3175..4170

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 639
  • Evalue 1.90e-180
DNA-directed RNA polymerase subunit alpha n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT73_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 639
  • Evalue 1.40e-180
  • rbh
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 331.0
  • Bit_score: 634
  • Evalue 1.80e-179
  • rbh

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Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 996
GTGCTCATTGCACAGCGTCCTACGCTCACCGAAGAGAACATCTCCGAGTTCCGCTCGCGGTTCGTCATCGAGCCCCTGGAGCCCGGCTTCGGATACACCCTCGGCAACTCGCTTCGTCGCACCCTGCTCTCGTCCATCCCCGGTGCCGCAGTCACCAGCATCCGCATCGACGGCGTGCTGCACGAGTTCAGCACCGTCCCGGGCGTGAAGGAAGACGTCACCGAGATCATCCTGAACATCAAGGGTCTCGTGGTGTCGAGCGAGCACGACGAGCCGATCACCGCCTACCTGCGCAAGACCGGCTCCGGCCAGGTCACCGCGGCGGACATCTCGGCTCCGGCGGGTGTGGAGATCCACAACCCCGAGCTGGTCATCGCGACCCTCAACGACAAGGCGAAGTTCGAGGTCGAGCTCACCATCGAGCGCGGCCGCGGCTACGTGTCGGCCCAGCAGAACCGCAACGAGTACAGCGAGGCGGGCCAGATCCCGATCGACTCGATCTACTCCCCGGTCCTGAAGGTCACCTACCGCGTCGAGGCCACCCGTGCCGGCGAGCGCACCGACTTCGACCGCCTCGTGGTCGACGTCGAGAGCAAGCCCGCGATCACCCCTCGTGACGCGATCGCGTCGGCCGGCCGCACGCTCGTCGAGCTGTTCGGTCTGGCGCGCGAGCTCAACAGCGCCGCCGAGGGCATCGAGATCGGCCCCGCGCCGGTCGACCAGGTCCTCAGCTCCGAGCTCTCGATGCCCATCGAGGACCTCGACCTGTCGGTCCGTTCGTACAACTGCCTCAAGCGCGAGGGCATCAACACCGTGAGCGAGCTCGTCTCGCTGTCGGAGACGCAGCTCATGAACATCCGCAACTTCGGTCAGAAGTCGGTGGATGAGGTCAAGGACAAGCTGACGGAGATGGGTCTGTCGCTGAAGGACTCGGTTCCCGGGTTCGACGGTGCCCACTTCTACAGCGGGTACGAAGAGGACGAGACCACCATCTGA
PROTEIN sequence
Length: 332
VLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVLHEFSTVPGVKEDVTEIILNIKGLVVSSEHDEPITAYLRKTGSGQVTAADISAPAGVEIHNPELVIATLNDKAKFEVELTIERGRGYVSAQQNRNEYSEAGQIPIDSIYSPVLKVTYRVEATRAGERTDFDRLVVDVESKPAITPRDAIASAGRTLVELFGLARELNSAAEGIEIGPAPVDQVLSSELSMPIEDLDLSVRSYNCLKREGINTVSELVSLSETQLMNIRNFGQKSVDEVKDKLTEMGLSLKDSVPGFDGAHFYSGYEEDETTI*