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SCNpilot_cont_500_bf_scaffold_3993

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3993_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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80..691
DNA (612bp) protein (204aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aq
Adenylate kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBC2_LEIAQ rbh
adenylate kinase rbh
SCNpilot_cont_500_bf_scaffold_3993_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

700..1530
DNA (831bp) protein (277aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Methionine aminopeptidase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT78_LEIAQ rbh
methionine aminopeptidase rbh
SCNpilot_cont_500_bf_scaffold_3993_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1691..1912
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9S1_LEIAQ
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
SCNpilot_cont_500_bf_scaffold_3993_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1991..2104
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTX2_LEIAQ
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
SCNpilot_cont_500_bf_scaffold_3993_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2243..2617
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3E3_LEIAQ
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
SCNpilot_cont_500_bf_scaffold_3993_6
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2656..3054
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Microbacteriaceae RepID=UPI00035C6A76
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_3993_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3175..4170
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT73_LEIAQ rbh
DNA-directed RNA polymerase subunit alpha rbh
SCNpilot_cont_500_bf_scaffold_3993_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4226..4777
DNA (552bp) protein (184aa)
50S ribosomal protein L17 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9R7_LEIAQ rbh
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
SCNpilot_cont_500_bf_scaffold_3993_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4852..5895
DNA (1044bp) protein (348aa)
Acetyltransferase, GNAT family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTW7_LEIAQ rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK71974.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative acetyltransferase, GNAT
SCNpilot_cont_500_bf_scaffold_3993_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5889..7931)
DNA (2043bp) protein (681aa)
Acyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3D9_LEIAQ rbh
Acyltransferase {ECO:0000313|EMBL:ERK71973.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
yrhL; lipopolysaccharide modification acyltransferase rbh
SCNpilot_cont_500_bf_scaffold_3993_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7987..8853
DNA (867bp) protein (289aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] rbh
tRNA pseudouridine synthase A n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBB4_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_3993_12
unknown

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9937..10800
DNA (864bp) protein (288aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3993_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10801..11187
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T707_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70472.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Displaying 13 items

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