ggKbase home page

SCNpilot_cont_500_bf_scaffold_3993_11

Organism: SCNPILOT_CONT_500_P_Leifsonia_70_8_8

partial RP 35 / 55 MC: 1 BSCG 36 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 7987..8853

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 288.0
  • Bit_score: 547
  • Evalue 1.10e-152
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 288.0
  • Bit_score: 466
  • Evalue 5.70e-129
  • rbh
tRNA pseudouridine synthase A n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBB4_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 288.0
  • Bit_score: 547
  • Evalue 8.10e-153
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGACCGACCTGGTGACGCGCTTCCGGCTCGACATCGCCTATCAGGGCACCGACTTCAACGGGTGGGGGCGGCAGCCCGGGCTCCGCACGGTGCAGGGCGTGCTCGAGGACGCCCTCGCGACCATCTTCCGCCGGGCCGGCGAGCCTCCTGTGCTCACCGTCGCCGGCCGAACCGATGCCGGTGTGCACGCGCTCGGCCAGGTCGCCCACGTCGATCTCGCTCCCGCGCAGGTCGCGCTACTGCGCCGCCCGCACGGCAAGCGGCCCCCGCTCCCGGCGCACGAAGCACTGGCTCGCCGCCTCAACGGCGTGCTCGGGCCGGTGGCCGATGTGATCGTGCGGGAGGCGGGCGAGGCCCTCCCCGGCTTCGACGCGCGCTTCTCGGCCGTGTGGCGCCGGTACGAGTACCGCGTCGCCGACCGCCACGCCTTCCGCGATCCGCTGCAGCGCCACCGCATCGCCTGGGTGTCGTCGGAGCTCGACGTCACCCGGATGGACATCGCGGCGCACGGCCTGCTCGGCCTGCACGACTTCGCGAGCTACTGCAAGGCGCGGGAGGGTGCGACGACGATCCGCACCCTCCAGGCGTTCTCCTGGCGGCGGGAGGCGGACGGCGTGCTCGCCGGCGAGGTCGTCGCCGACGCCTTCTGCCACAGCATGGTCCGGGCGCTCGTCGGGGCGTGCGTGGAGGTGGGGGAGGGCAAGCTCGAGCCGGGCGACCTCATCGGCCTCCGCGACGAGCAGCGCCGCACCAACGCGTTCAAGGTCATGCCCGCGCGCGGCCTGACCCTGATGGAGGTCGGCTATCCGGCCGCAGCCGAGCTCGCCCTGCGCGCCGAGCAGACCCGGGCGCTGCGCTCGCTCTGA
PROTEIN sequence
Length: 289
MTDLVTRFRLDIAYQGTDFNGWGRQPGLRTVQGVLEDALATIFRRAGEPPVLTVAGRTDAGVHALGQVAHVDLAPAQVALLRRPHGKRPPLPAHEALARRLNGVLGPVADVIVREAGEALPGFDARFSAVWRRYEYRVADRHAFRDPLQRHRIAWVSSELDVTRMDIAAHGLLGLHDFASYCKAREGATTIRTLQAFSWRREADGVLAGEVVADAFCHSMVRALVGACVEVGEGKLEPGDLIGLRDEQRRTNAFKVMPARGLTLMEVGYPAAAELALRAEQTRALRSL*