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SCNpilot_cont_500_bf_scaffold_7073

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7073_1
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..842)
DNA (840bp) protein (280aa)
Methyltransferase type 12 n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WVJ2_METML
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ACT47941.1}; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
SCNpilot_cont_500_bf_scaffold_7073_2
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(839..2023)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036D008F rbh
Pyridoxamine 5-phosphate oxidase {ECO:0000313|EMBL:KGJ08892.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
DegT/DnrJ/EryC1/StrS aminotransferase
SCNpilot_cont_500_bf_scaffold_7073_3
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2029..2970)
DNA (942bp) protein (314aa)
GDP-L-fucose synthase (EC:1.1.1.271); K02377 GDP-L-fucose synthase [EC:1.1.1.271]
GDP-L-fucose synthase n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SNG9_9RHOB
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
SCNpilot_cont_500_bf_scaffold_7073_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2967..4040)
DNA (1074bp) protein (358aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036B1B61 rbh
SCNpilot_cont_500_bf_scaffold_7073_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4440..5321
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036230E7 rbh
wxocBC; putative glycosyltransferase, fusion protein
Putative glycosyltransferase, fusion protein {ECO:0000313|EMBL:CAQ44207.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_cont_500_bf_scaffold_7073_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5472..5717)
DNA (246bp) protein (82aa)
Integrase, catalytic region n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2L8_9BRAD
Integrase, catalytic region {ECO:0000313|EMBL:EAQ33523.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
glucose-1-phosphate thymidylyltransferase
SCNpilot_cont_500_bf_scaffold_7073_7
unknown

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5939..6214
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7073_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6583..7140)
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Methylocystis parvus RepID=UPI0002DB012A
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIM26167.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_500_bf_scaffold_7073_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7158..8213)
DNA (1056bp) protein (352aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] rbh
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZT8_RHOP2 rbh
SCNpilot_cont_500_bf_scaffold_7073_10
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8345..8875)
DNA (531bp) protein (177aa)
rhamnosyltransferase; K12990 rhamnosyltransferase [EC:2.4.1.-]
Rhamnosyltransferase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M5I2_METRJ
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ45637.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
Displaying 10 items

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