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SCNpilot_cont_500_bf_scaffold_2095

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2095_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..721
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAI3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EWY40747.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2095_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

739..1416
DNA (678bp) protein (226aa)
Hydrolase n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UFK8_ALCXX
Isochorismatase family protein {ECO:0000313|EMBL:AHC44475.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
FIG002283: Isochorismatase family protein
SCNpilot_cont_500_bf_scaffold_2095_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1697..2773)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TV84_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE10372.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2095_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2823..4265)
DNA (1443bp) protein (481aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TV83_9BRAD rbh
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:CCE10371.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
peptidase C14 caspase catalytic subunit p20
SCNpilot_cont_500_bf_scaffold_2095_5
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4433..5695
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHD2_METS4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACA19358.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_2095_6
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5692..6138
DNA (447bp) protein (149aa)
Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IPP0_9BRAD
ATPase {ECO:0000313|EMBL:KHD18193.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2095_7
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6160..7857
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TV82_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE10370.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2095_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7997..9223)
DNA (1227bp) protein (409aa)
amine oxidase; K00274 monoamine oxidase [EC:1.4.3.4]
Amine oxidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQJ5_NITHX
Amine oxidase {ECO:0000313|EMBL:KFC76009.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_2095_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9220..10764)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00036F1598 rbh
Na+/H+ antiporter {ECO:0000313|EMBL:EKS36990.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sodium/hydrogen exchanger; K03316 monovalent cation:H+ antiporter, CPA1 family
SCNpilot_cont_500_bf_scaffold_2095_10
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10978..12078)
DNA (1101bp) protein (367aa)
MdlB; K15054 (S)-mandelate dehydrogenase [EC:1.1.99.31] rbh
MdlB n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5A8L6_BURGB rbh
Mandelate dehydrogenase {ECO:0000313|EMBL:KGE02014.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_cont_500_bf_scaffold_2095_11
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12078..13793)
DNA (1716bp) protein (572aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D7AE9B rbh
Acetolactate synthase {ECO:0000313|EMBL:KGE02013.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_cont_500_bf_scaffold_2095_12
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13814..15112)
DNA (1299bp) protein (433aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E56FDC
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGE02012.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
TRAP C4-dicarboxylate transport system permease DctM
SCNpilot_cont_500_bf_scaffold_2095_13
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15117..15671)
DNA (555bp) protein (185aa)
Putative TrapT family, dctQ subunit, C4-dicarboxylate transport n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ES36_BRASB
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGE02011.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
TRAP C4-dicarboxylate transport system subunit DctQ
SCNpilot_cont_500_bf_scaffold_2095_14
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15739..16794)
DNA (1056bp) protein (352aa)
UDPglucose 6-dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6V9_9BRAD
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KGE02010.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
TRAP dicarboxylate transporter DctP subunit
SCNpilot_cont_500_bf_scaffold_2095_15
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16878..17339)
DNA (462bp) protein (154aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3CLH9_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:CDN56888.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2095_16
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17349..18791)
DNA (1443bp) protein (481aa)
salicylaldehyde dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI0003747E0A
Salicylaldehyde dehydrogenase {ECO:0000313|EMBL:KGE02008.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
dehydrogenase
SCNpilot_cont_500_bf_scaffold_2095_17
unknown

Not on your lists

18952..19074
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2095_18
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19321..20229
DNA (909bp) protein (303aa)
LysR family regulatory helix-turn-helix protein 103 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T723_ALCXX rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KGD98308.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
putative LysR-family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2095_19
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

20585..21523
DNA (939bp) protein (313aa)
Peptidase, M24 family {ECO:0000313|EMBL:EEX48948.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEX48948.1};; TaxID=645512 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonquetella anthropi E3_33 E1.;"
Xaa-Pro aminopeptidase n=3 Tax=Jonquetella RepID=H0UIS5_9BACT
pepP; peptidase
SCNpilot_cont_500_bf_scaffold_2095_20
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21563..22600
DNA (1038bp) protein (346aa)
Bacterial extracellular solute-binding protein, family 7 family protein 2 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HI09_ACHXA rbh
extracellular solute-binding protein, family 7 family protein 2 rbh
Bacterial extracellular solute-binding protein, family 7 family protein 2 {ECO:0000313|EMBL:ADP16709.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_cont_500_bf_scaffold_2095_21
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22665..23285
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000310C7BB rbh
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KFG67565.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2095_22
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23282..24565
DNA (1284bp) protein (428aa)
TRAP transporter subunit DctM 7 n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KRT8_9BURK rbh
Membrane protein {ECO:0000313|EMBL:KFG67566.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
TRAP transporter subunit DctM rbh
SCNpilot_cont_500_bf_scaffold_2095_23
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24614..24748
DNA (135bp) protein (45aa)
Uncharacterized protein n=35 Tax=Bordetella RepID=K0MJG2_BORPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ50066.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;"
Displaying 23 items

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