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SCNpilot_cont_500_bf_scaffold_2668

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2668_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1013)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNF1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM25493.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2668_2
unknown

Not on your lists

comp(964..1368)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000374623D
SCNpilot_cont_500_bf_scaffold_2668_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1529..2110)
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Pseudomonas putida RepID=M7R9L4_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:KFC64071.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2668_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2107..3525)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EDC01C
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:KFC64072.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2668_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3672..5015
DNA (1344bp) protein (448aa)
Divalent metal cation transporter MntH n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PB68_9BRAD
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
manganese transport protein MntH; K03322 manganese transport protein
SCNpilot_cont_500_bf_scaffold_2668_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5083..6621)
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D76B6A rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC64073.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
yjgR; hypothetical protein; K06915 rbh
SCNpilot_cont_500_bf_scaffold_2668_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6776..7162
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EAFBA9
Uncharacterized protein {ECO:0000313|EMBL:KFC64074.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2668_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7337..9316
DNA (1980bp) protein (660aa)
Methylmalonyl-CoA mutase small subunit (MCM-beta) {ECO:0000313|EMBL:KFC64075.1}; EC=5.4.99.2 {ECO:0000313|EMBL:KFC64075.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methylmalonyl-CoA mutase (EC:5.4.99.2); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] rbh
Methylmalonyl-CoA mutase, N-terminal domain/subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNJ5_9RHIZ
SCNpilot_cont_500_bf_scaffold_2668_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9330..10151
DNA (822bp) protein (274aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KFC64076.1}; EC=2.7.4.7 {ECO:0000313|EMBL:KFC64076.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
Phosphomethylpyrimidine kinase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZM13_METPB
SCNpilot_cont_500_bf_scaffold_2668_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10148..12223
DNA (2076bp) protein (692aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNJ7_9RHIZ
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EIM25539.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_500_bf_scaffold_2668_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12293..12565)
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC64078.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_2668_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12663..13451)
DNA (789bp) protein (263aa)
Ornithine carbamoyltransferase {ECO:0000313|EMBL:KFC64079.1}; EC=2.1.3.3 {ECO:0000313|EMBL:KFC64079.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putrescine/spermidine ABC transporter permease n=1 Tax=Xanthobacteraceae RepID=UPI000379CA65
spermidine/putrescine ABC transporter permease; K11074 putrescine transport system permease protein
SCNpilot_cont_500_bf_scaffold_2668_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13448..14350)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E33A1F
Putrescine transport system permease protein PotH {ECO:0000313|EMBL:KFC64080.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
potB; ABC transporter permease; K11075 putrescine transport system permease protein
SCNpilot_cont_500_bf_scaffold_2668_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14347..15516)
DNA (1170bp) protein (390aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003754D7D
spermidine/putrescine ABC transporter ATP-binding subunit
SCNpilot_cont_500_bf_scaffold_2668_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15543..16655)
DNA (1113bp) protein (371aa)
Putrescine-binding periplasmic protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ98_9RHIZ
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
family 1 extracellular solute-binding protein; K11073 putrescine transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_2668_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16835..17572
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UJE3_METS4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC64083.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2668_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17579..18862)
DNA (1284bp) protein (428aa)
mdeA; methionine gamma-lyase (EC:4.4.1.11); K01761 methionine-gamma-lyase [EC:4.4.1.11]
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2Z4_9RHIZ
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:KFC64084.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_2668_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19003..19461
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DC18AF
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KFC64085.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2668_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19486..20493)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003733864 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC64087.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2668_20
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20626..21786)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031B8549
Esterase {ECO:0000313|EMBL:KFG69529.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2668_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21903..22889
DNA (987bp) protein (329aa)
arginine/ornithine transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] rbh
membrane ATPase/protein kinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D3DD4A rbh
LAO/AO transport system ATPase {ECO:0000313|EMBL:KFC64089.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_2668_22
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22897..23433
DNA (537bp) protein (179aa)
peptidase C15 pyroglutamyl peptidase I; K01304 pyroglutamyl-peptidase [EC:3.4.19.3]
Pyroglutamyl-peptidase I {ECO:0000256|SAAS:SAAS00130640}; EC=3.4.19.3 {ECO:0000256|SAAS:SAAS00130640};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00037B6570
SCNpilot_cont_500_bf_scaffold_2668_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23483..24484)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D3EDDE rbh
L-asparaginase II {ECO:0000313|EMBL:KFC64097.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
L-asparaginase II
SCNpilot_cont_500_bf_scaffold_2668_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24590..25429
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003678BEE rbh
Putative hydrolase (Serine esterase) {ECO:0000313|EMBL:KFC64098.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2668_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25482..25718
DNA (237bp) protein (79aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNK6_9RHIZ
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KFC64099.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AsnC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2668_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26369..28300
DNA (1932bp) protein (644aa)
malic enzyme (EC:1.1.1.40 2.3.1.8); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
malic enzyme n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DE3161
Uncharacterized protein {ECO:0000313|EMBL:KFC64105.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_2668_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28444..30045
DNA (1602bp) protein (534aa)
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW53_9RHIZ rbh
Periplasmic dipeptide transport protein {ECO:0000313|EMBL:KFC64107.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular solute-binding protein; K15580 oligopeptide transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2668_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30199..31056
DNA (858bp) protein (286aa)
Putative D-alanine aminotransferase {ECO:0000313|EMBL:KFC64111.1}; EC=2.6.1.21 {ECO:0000313|EMBL:KFC64111.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037CF06B rbh
putative D-alanine aminotransferase rbh
SCNpilot_cont_500_bf_scaffold_2668_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31183..31434)
DNA (252bp) protein (84aa)
guaD; guanine deaminase (EC:3.5.4.3); K01487 guanine deaminase [EC:3.5.4.3]
Guanine deaminase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P613_AZOS1
Guanine deaminase {ECO:0000313|EMBL:KFC64112.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying 29 items

View Taxonomy