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SCNpilot_cont_500_bf_scaffold_369

Search features with annotation key words

Displaying items 31-60 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_369_31
unknown

Not on your lists

28570..28869
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_369_32
unknown

Not on your lists

comp(29043..29387)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_369_33
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29554..29850)
DNA (297bp) protein (99aa)
Transposase IS66 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IP73_XANP2
Mobile element protein {ECO:0000313|EMBL:EYD77500.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
transposase IS66
SCNpilot_cont_500_bf_scaffold_369_34
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29857..30096)
DNA (240bp) protein (80aa)
Putative transposase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I0Q5_AZOC5
transposase
Putative transposase {ECO:0000313|EMBL:BAF87283.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_369_35
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30938..32389
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036F9600
Site-specific recombinase XerD {ECO:0000313|EMBL:EJC76945.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
SCNpilot_cont_500_bf_scaffold_369_36
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32367..34358
DNA (1992bp) protein (664aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003790B48 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJC76946.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
SCNpilot_cont_500_bf_scaffold_369_37
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34358..36286
DNA (1929bp) protein (643aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037B26CD
Site-specific recombinase XerD {ECO:0000313|EMBL:KEZ21510.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_500_bf_scaffold_369_38
unknown

Not on your lists

36265..36723
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_369_39
unknown

Not on your lists

comp(36869..37117)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_369_40
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37156..38061)
DNA (906bp) protein (302aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BJ3_MESSB rbh
Crp/FNR family transcriptional regulator rbh
Uncharacterized protein {ECO:0000313|EMBL:ETR79411.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_500_bf_scaffold_369_41
unknown

Not on your lists

comp(38248..38847)
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_369_42
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38889..39191
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BJ1_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65234.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_369_43
unknown

Not on your lists

comp(39385..39570)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_369_44
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39730..40389
DNA (660bp) protein (220aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BI8_MESSB rbh
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ETR79408.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
isoprenylcysteine carboxyl methyltransferase rbh
SCNpilot_cont_500_bf_scaffold_369_45
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40504..41019
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TV70_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE10358.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_369_46
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41422..43626
DNA (2205bp) protein (735aa)
Heavy metal translocating P-type ATPase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BI2_MESSB rbh
heavy metal translocating P-type ATPase rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABG65243.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_369_47
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43653..44648
DNA (996bp) protein (332aa)
phosphoribosylpyrophosphate synthetase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
phosphoribosylpyrophosphate synthetase n=1 Tax=Afipia birgiae RepID=UPI000313FCEE rbh
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ABG65244.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_369_48
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

44645..45025
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037BD599
Tax=GWC2_Chloroflexi_49_37_curated
SCNpilot_cont_500_bf_scaffold_369_49
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44970..47438
DNA (2469bp) protein (823aa)
D-xylulose 5-phosphate n=1 Tax=Afipia birgiae RepID=UPI0002DBBFA8 rbh
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase {ECO:0000313|EMBL:ABG65245.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase rbh
SCNpilot_cont_500_bf_scaffold_369_50
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47454..48812
DNA (1359bp) protein (453aa)
beta-Casp domain-containing protein, partial n=1 Tax=Afipia birgiae RepID=UPI000362FDD4 rbh
Beta-Casp domain-containing protein {ECO:0000313|EMBL:ETR79393.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
beta-lactamase-like protein; K07576 metallo-beta-lactamase family protein
SCNpilot_cont_500_bf_scaffold_369_51
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48809..50335
DNA (1527bp) protein (509aa)
thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] rbh
Putative thymidine phosphorylase {ECO:0000255|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000255|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000255|HAMAP-Rule:MF_00703}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Putative thymidine phosphorylase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=TYPH_MESSB rbh
SCNpilot_cont_500_bf_scaffold_369_52
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50332..50850
DNA (519bp) protein (173aa)
Cytochrome B561 n=1 Tax=Rhizobium sp. CF142 RepID=J1T4L7_9RHIZ
Putative transmembrane cytochrome b562 {ECO:0000313|EMBL:CDN95858.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
putative transmembrane cytochrome b562
SCNpilot_cont_500_bf_scaffold_369_53
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50909..52192
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000373A7E0 rbh
Membrane protein {ECO:0000313|EMBL:ETR79390.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_369_54
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52583..54172
DNA (1590bp) protein (530aa)
Twin-arginine translocation pathway signal n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BH6_MESSB rbh
Copper oxidase {ECO:0000313|EMBL:ETR79388.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
twin-arginine translocation pathway signal rbh
SCNpilot_cont_500_bf_scaffold_369_55
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54407..54757
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC62355.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_369_56
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54813..55376)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE28 RepID=UPI0003601AF7
Uncharacterized protein {ECO:0000313|EMBL:KFC62356.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_369_57
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55436..56017)
DNA (582bp) protein (194aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5M7_9BRAD
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:KFC62357.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
SCNpilot_cont_500_bf_scaffold_369_58
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56017..56565)
DNA (549bp) protein (183aa)
Twin-arginine translocation pathway signal n=3 Tax=Oligotropha carboxidovorans RepID=B6J9V2_OLICO
twin-arginine translocation pathway signal
Putative metal-binding protein {ECO:0000313|EMBL:AEI05209.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_369_59
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56562..56693)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6J9V4_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS30434.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_cont_500_bf_scaffold_369_60
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56690..59866)
DNA (3177bp) protein (1059aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMF3_XANP2
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:KFC64594.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
CzcA family heavy metal efflux protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Displaying items 31-60 of 167 in total

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