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SCNpilot_cont_500_bf_scaffold_369

Search features with annotation key words

Displaying items 1-30 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_369_1
bacterium YEK0313, Bacteria

Not on your lists

comp(2..481)
DNA (480bp) protein (160aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=ILVC_AZOC5
SCNpilot_cont_500_bf_scaffold_369_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(496..1158)
DNA (663bp) protein (221aa)
Transcriptional regulator, TetR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A247_STAND rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KFC67053.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TetR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_369_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1298..1843
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000375313D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH87662.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_369_4
bacterium YEK0313, Bacteria

Not on your lists

comp(1880..2602)
DNA (723bp) protein (241aa)
Putative hydrolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I8U3_AZOC5 rbh
(S)-2-haloacid dehalogenase 4A {ECO:0000313|EMBL:CEJ12739.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hydrolase rbh
SCNpilot_cont_500_bf_scaffold_369_5
bacterium YEK0313, Bacteria

Not on your lists

comp(2712..3458)
DNA (747bp) protein (249aa)
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JBX0_AGRRK
Virulence regulon transcriptional activator VirF {ECO:0000313|EMBL:CEJ12738.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator protein
SCNpilot_cont_500_bf_scaffold_369_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3555..3782)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC67051.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_369_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3785..4327)
DNA (543bp) protein (181aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:KFC67050.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KFC67050.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acetolactate synthase small subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
Acetolactate synthase, small subunit n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFF6_METS4
SCNpilot_cont_500_bf_scaffold_369_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4375..5064)
DNA (690bp) protein (230aa)
Putative glutathione S-transferase (GST) {ECO:0000313|EMBL:KFC67049.1}; EC=2.5.1.18 {ECO:0000313|EMBL:KFC67049.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutathione S-transferase domain-containing protein; K04097 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035DC6B0
SCNpilot_cont_500_bf_scaffold_369_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5061..5771)
DNA (711bp) protein (237aa)
Aspartate racemase {ECO:0000313|EMBL:KFC67048.1}; EC=5.1.1.13 {ECO:0000313|EMBL:KFC67048.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13]
Aspartate racemase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HGG9_9RHIZ
SCNpilot_cont_500_bf_scaffold_369_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5860..7623)
DNA (1764bp) protein (588aa)
Acetolactate synthase {ECO:0000313|EMBL:KFC67047.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KFC67047.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acetolactate synthase large subunit, biosynthetic type; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
acetolactate synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000318F348 rbh
SCNpilot_cont_500_bf_scaffold_369_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7968..9425
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000374960D
Diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:KFC67046.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
diguanylate cyclase
SCNpilot_cont_500_bf_scaffold_369_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9516..10430)
DNA (915bp) protein (305aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] rbh
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00037BCE47 rbh
SCNpilot_cont_500_bf_scaffold_369_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10653..11273
DNA (621bp) protein (207aa)
Phosphoserine phosphatase {ECO:0000313|EMBL:KFC67044.1}; EC=3.1.3.3 {ECO:0000313|EMBL:KFC67044.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3]
Phosphoserine phosphatase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q303_9RHIZ
SCNpilot_cont_500_bf_scaffold_369_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11274..11615)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003819608
Uncharacterized protein {ECO:0000313|EMBL:KFC67043.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_369_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11780..13300)
DNA (1521bp) protein (507aa)
protease Do (EC:3.4.21.107) rbh
Periplasmic serine protease, Do/DeqQ family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVQ1_9RHIZ
Peptidase Do {ECO:0000313|EMBL:KFC67042.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_369_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13425..13616)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EF369E
Uncharacterized protein {ECO:0000313|EMBL:KFC67041.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09937 hypothetical protein
SCNpilot_cont_500_bf_scaffold_369_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13635..14144)
DNA (510bp) protein (170aa)
HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
Protein HflC n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7E8_STAND
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_369_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14517..15671)
DNA (1155bp) protein (385aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-] rbh
HflK protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVP8_9RHIZ rbh
HflK protein {ECO:0000313|EMBL:KFC67039.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_369_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15830..16360)
DNA (531bp) protein (177aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase n=1 Tax=uncultured bacterium RepID=F8UVV0_9BACT
SCNpilot_cont_500_bf_scaffold_369_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16367..16849)
DNA (483bp) protein (161aa)
Sortase-like acyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVP6_9RHIZ
General L-amino acid transport system permease {ECO:0000313|EMBL:KFC73775.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
N-acetyltransferase GCN5
SCNpilot_cont_500_bf_scaffold_369_21
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17094..18032
DNA (939bp) protein (313aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B642B6 rbh
Transcriptional regulator protein {ECO:0000313|EMBL:CDX27202.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
transcriptional regulator protein rbh
SCNpilot_cont_500_bf_scaffold_369_22
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17983..18711)
DNA (729bp) protein (243aa)
Short-chain dehydrogenase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GLC8_9RHIZ
Short-chain dehydrogenase {ECO:0000313|EMBL:ESX73390.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_369_23
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18853..19509)
DNA (657bp) protein (219aa)
Transcriptional regulator, GntR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILM0_METNO
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACL61995.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_369_24
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19698..20714
DNA (1017bp) protein (339aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WA99_MAGSA rbh
TRAP-type C4-dicarboxylate transport system, periplasmic component rbh
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:BAE49226.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCNpilot_cont_500_bf_scaffold_369_25
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20716..22671
DNA (1956bp) protein (652aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WA98_MAGSA rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAE49227.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCNpilot_cont_500_bf_scaffold_369_26
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22707..24089
DNA (1383bp) protein (461aa)
malonyl-CoA decarboxylase; K01578 malonyl-CoA decarboxylase [EC:4.1.1.9]
Malonyl-CoA decarboxylase {ECO:0000313|EMBL:AEI04741.1}; EC=4.1.1.9 {ECO:0000313|EMBL:AEI04741.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Malonyl-CoA decarboxylase n=2 Tax=Oligotropha carboxidovorans RepID=B6JCU5_OLICO
SCNpilot_cont_500_bf_scaffold_369_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24115..25548
DNA (1434bp) protein (478aa)
Putative O-succinylbenzoate--CoA ligase (MenE) {ECO:0000313|EMBL:KFC64151.1}; EC=6.2.1.26 {ECO:0000313|EMBL:KFC64151.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Malonyl-CoA synthase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA11_9RHIZ
AMP-dependent synthetase and ligase
SCNpilot_cont_500_bf_scaffold_369_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25603..26817)
DNA (1215bp) protein (405aa)
Transporter, major facilitator family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A330_9PROT rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:KFC71643.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator superfamily mfs_1
SCNpilot_cont_500_bf_scaffold_369_29
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26999..27901)
DNA (903bp) protein (301aa)
Thymidylate synthase {ECO:0000313|EMBL:AKH43217.1}; EC=2.1.1.45 {ECO:0000313|EMBL:AKH43217.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45] rbh
Thymidylate synthase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TYX8_9RHOB rbh
SCNpilot_cont_500_bf_scaffold_369_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28169..28474
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73777.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying items 1-30 of 167 in total

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