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SCNpilot_cont_500_bf_scaffold_531

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_531_1
unknown

Not on your lists

comp(2..916)
DNA (915bp) protein (305aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_531_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1019..1597)
DNA (579bp) protein (193aa)
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036BB207 rbh
Putative transcriptional regulator {ECO:0000313|EMBL:KFC67269.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_531_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1922..3568
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TQ27_9BRAD rbh
Putative amidohydrolase {ECO:0000313|EMBL:KFC67270.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amidohydrolase; K07047
SCNpilot_cont_500_bf_scaffold_531_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3585..4526
DNA (942bp) protein (314aa)
glutathione ABC transporter permease n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B72670 rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:KFC67271.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport permease
SCNpilot_cont_500_bf_scaffold_531_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4526..5410
DNA (885bp) protein (295aa)
diguanylate cyclase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B63F2F rbh
Peptide transport system permease DppC {ECO:0000313|EMBL:KFC67272.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_531_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5446..7032
DNA (1587bp) protein (529aa)
peptide ABC transporter substrate-binding protein, partial n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B752A0 rbh
Putative ABC transporter, substrate binding subunit {ECO:0000313|EMBL:KFC67273.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
family 5 extracellular solute-binding protein
SCNpilot_cont_500_bf_scaffold_531_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7103..8536
DNA (1434bp) protein (478aa)
N-ethylammeline chlorohydrolase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039F9DB1 rbh
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:KFC67274.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amidohydrolase
SCNpilot_cont_500_bf_scaffold_531_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8630..9532)
DNA (903bp) protein (301aa)
Putative polyphosphate kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVP4_RHITR
Uncharacterized protein {ECO:0000313|EMBL:KFC69415.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative polyphosphate kinase
SCNpilot_cont_500_bf_scaffold_531_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9791..11038
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TUF8_9RHOB
Salicylate hydroxylase {ECO:0000313|EMBL:KFC64128.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_531_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11039..11392)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003799C45
Type IV pilus assembly PilZ {ECO:0000313|EMBL:KFC64127.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
type IV pilus assembly PilZ
SCNpilot_cont_500_bf_scaffold_531_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11529..11987)
DNA (459bp) protein (153aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKK5_METNO
Cupin domain-containing protein {ECO:0000313|EMBL:KFC64125.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cupin
SCNpilot_cont_500_bf_scaffold_531_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12044..12742)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035D319E rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:KFC64124.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_531_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12745..13494)
DNA (750bp) protein (250aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW25_9RHIZ
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:KFC64123.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter related; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_531_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13487..14476)
DNA (990bp) protein (330aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RLB0_9RHIZ
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:KFC64122.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_531_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14473..15399)
DNA (927bp) protein (309aa)
ABC transporter permease protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRP2_9PROT rbh
Putative branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:KFC64121.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_531_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15516..16688)
DNA (1173bp) protein (391aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QQQ5_9BRAD
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:KFC64120.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_531_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17058..17222)
DNA (165bp) protein (55aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1042209 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens HK44.;"
catalase/peroxidase HPI; K03782 catalase-peroxidase [EC:1.11.1.21]
catalase/hydroperoxidase HPI(I) n=1 Tax=Pseudomonas fluorescens RepID=UPI00035F4C5F
SCNpilot_cont_500_bf_scaffold_531_18
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17219..19219)
DNA (2001bp) protein (667aa)
catalase/peroxidase HPI; K03782 catalase-peroxidase [EC:1.11.1.21] rbh
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Catalase-peroxidase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1L1_STAND rbh
SCNpilot_cont_500_bf_scaffold_531_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19442..20368
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036C17AF rbh
Transcriptional regulator {ECO:0000313|EMBL:KFC69425.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
SCNpilot_cont_500_bf_scaffold_531_20
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20709..21515
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036875A6
Uncharacterized protein {ECO:0000313|EMBL:EIM27126.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_531_21
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21541..23724
DNA (2184bp) protein (728aa)
cellulose synthase catalytic subunit; K00694 cellulose synthase (UDP-forming) [EC:2.4.1.12]
Cellulose synthase catalytic subunit (UDP-forming) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT33_9RHIZ
Cellulose synthase catalytic subunit (UDP-forming) {ECO:0000313|EMBL:EIM27125.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_500_bf_scaffold_531_22
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23721..26162
DNA (2442bp) protein (814aa)
Cellulose synthase BcsB n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7Y8_STAND rbh
Uncharacterized protein {ECO:0000313|EMBL:KFG67781.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
cellulose synthase BcsB rbh
SCNpilot_cont_500_bf_scaffold_531_23
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26177..27175
DNA (999bp) protein (333aa)
cellulase (EC:3.2.1.4); K01179 endoglucanase [EC:3.2.1.4]
Cellulase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7Y9_STAND
Endoglucanase {ECO:0000313|EMBL:KFG67782.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_500_bf_scaffold_531_24
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27166..29295
DNA (2130bp) protein (710aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003660C23 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFG67783.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_531_25
unknown

Not on your lists

29323..29481
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_531_26
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(29615..31051)
DNA (1437bp) protein (479aa)
Patatin n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I0L2_RHOVT
Uncharacterized protein {ECO:0000313|EMBL:KDP73277.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
patatin
SCNpilot_cont_500_bf_scaffold_531_27
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31223..32284)
DNA (1062bp) protein (354aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
sfuC; iron(III) ABC transporter; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30]
ABC-type spermidine/putrescine transport system, ATPase component n=1 Tax=Rhizobium sp. AP16 RepID=J2CNM4_9RHIZ
SCNpilot_cont_500_bf_scaffold_531_28
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32281..33861)
DNA (1581bp) protein (527aa)
Iron(III) ABC transporter n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J6N8_AGRRK
Iron ABC transporter permease {ECO:0000313|EMBL:KEA04768.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
sfuB; iron(III) ABC transporter; K02011 iron(III) transport system permease protein
SCNpilot_cont_500_bf_scaffold_531_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33917..34930)
DNA (1014bp) protein (338aa)
Iron(III)-binding protein periplasmic protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6URZ7_9RHIZ
Iron(III)-binding protein periplasmic protein {ECO:0000313|EMBL:ENN84485.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
sfuA; iron(III) ABC transporter; K02012 iron(III) transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_531_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35130..35657)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA8154
Transcriptional regulator {ECO:0000313|EMBL:KFC74014.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator
Displaying items 1-30 of 60 in total

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