ggKbase home page

SCNpilot_cont_500_bf_scaffold_576

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_576_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191..1471)
DNA (1281bp) protein (427aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC67495.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_576_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1779..2624)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003741A69 rbh
Phosphomannomutase {ECO:0000313|EMBL:KGT74670.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_576_3
unknown

Not on your lists

comp(2740..3030)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_576_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3084..5429)
DNA (2346bp) protein (782aa)
carboxylesterase; K03929 para-nitrobenzyl esterase [EC:3.1.1.-] rbh
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
carboxylesterase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037ADB74 rbh
SCNpilot_cont_500_bf_scaffold_576_5
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5604..6176
DNA (573bp) protein (191aa)
AraC family transcriptional regulator n=2 Tax=Alcaligenes RepID=M5J3H0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KHL25681.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
ThiJ/PfpI family protein
SCNpilot_cont_500_bf_scaffold_576_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6011..6880)
DNA (870bp) protein (290aa)
Glutathione S-transferase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LX88_RHITR
glutathione S-transferase family protein
Glutathione S-transferase family protein {ECO:0000313|EMBL:AGB74774.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_576_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6903..7607)
DNA (705bp) protein (235aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037C198C rbh
Glutathione S-transferase {ECO:0000313|EMBL:GAN76786.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_500_bf_scaffold_576_8
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7604..8575)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TCU2_BURPP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACD19516.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCNpilot_cont_500_bf_scaffold_576_9
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8579..9229)
DNA (651bp) protein (217aa)
Bacterioferritin comigratory protein, putative n=1 Tax=Ricinus communis RepID=B9TFG1_RICCO rbh
bacterioferritin comigratory protein, putative rbh
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACD19515.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCNpilot_cont_500_bf_scaffold_576_10
unknown

Not on your lists

9364..9996
DNA (633bp) protein (211aa)
TetR family transcriptional regulator n=1 Tax=Burkholderia terrae BS001 RepID=I5CH87_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:CPR22500.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_576_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10245..11345)
DNA (1101bp) protein (367aa)
Opine oxidase subunit B {ECO:0000313|EMBL:KFC63388.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC63388.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000374B9E9
oxidoreductase
SCNpilot_cont_500_bf_scaffold_576_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11384..12475)
DNA (1092bp) protein (364aa)
Putative opine dehydrogenase {ECO:0000313|EMBL:KFC65332.1}; EC=1.5.1.28 {ECO:0000313|EMBL:KFC65332.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Ketopantoate reductase (EC:1.5.1.28)
Coenzyme 420-dependent octopine/nopaline dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU94_9RHIZ
SCNpilot_cont_500_bf_scaffold_576_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12553..14295)
DNA (1743bp) protein (581aa)
Oligopeptide-binding protein AppA n=1 Tax=Bacillus subtilis subsp. spizizenii (strain TU-B-10) RepID=G4NWD9_BACPT
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:KFC65331.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
oligopeptide-binding protein AppA
SCNpilot_cont_500_bf_scaffold_576_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14343..15455)
DNA (1113bp) protein (371aa)
Opine oxidase subunit B {ECO:0000313|EMBL:KFC65330.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC65330.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
UPI0003CEE9D4 related cluster n=2 Tax=unknown RepID=UPI0003CEE9D4 rbh
oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_576_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15481..16515)
DNA (1035bp) protein (345aa)
Oligopeptide transport protein (ABC superfamily, ATP-binding protein) {ECO:0000313|EMBL:KFC65329.1}; EC=3.6.3.27 {ECO:0000313|EMBL:KFC65329.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Peptide/nickel transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S9Y9_9BACT
peptide ABC transporter; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_576_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16508..17590)
DNA (1083bp) protein (361aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KFC65328.1}; EC=3.6.3.- {ECO:0000313|EMBL:KFC65328.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGC9_THEM7
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_576_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17590..18534)
DNA (945bp) protein (315aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NE48_DESAR
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:KFC65327.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_576_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18540..19508)
DNA (969bp) protein (323aa)
Dipeptide/oligopeptide/nickel ABC transporter permease n=1 Tax=Clostridium termitidis CT1112 RepID=S0FLZ4_9CLOT
Dipeptide transport system permease protein dppB (ABC transporter) {ECO:0000313|EMBL:KFC65326.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_576_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19725..20630)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003715403
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC65325.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_576_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20774..21670)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F1BDA9
AraC family transcriptional regulator {ECO:0000313|EMBL:KFC65324.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_576_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21899..23431
DNA (1533bp) protein (511aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Thermus oshimai JL-2 RepID=K7QVZ7_THEOS
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFC65323.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC-type dipeptide transport system, periplasmic component
SCNpilot_cont_500_bf_scaffold_576_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23457..24383
DNA (927bp) protein (309aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Thermus oshimai JL-2 RepID=K7RG83_THEOS
Putative peptide transporter permease subunit: membrane component of ABC superfamily protein {ECO:0000313|EMBL:KFC65322.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_576_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24380..26350
DNA (1971bp) protein (657aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KFC65321.1}; EC=3.6.3.- {ECO:0000313|EMBL:KFC65321.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KIA0_STRNV rbh
peptide/opine/nickel ABC transporter permease/ATP-binding protein
SCNpilot_cont_500_bf_scaffold_576_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26347..27444
DNA (1098bp) protein (366aa)
Oligopeptide ABC transporter, ATP-binding protein AppF n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2N0_9PROT
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KFC65320.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_576_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27464..28669
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI0003726EC0
SoxB protein {ECO:0000313|EMBL:KFC65319.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
FAD dependent oxidoreductase
SCNpilot_cont_500_bf_scaffold_576_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28744..29712
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B336F
Putative Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:KFC65318.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
succinylglutamate desuccinylase
SCNpilot_cont_500_bf_scaffold_576_27
bacterium YEK0313, Bacteria

Not on your lists

30013..30957
DNA (945bp) protein (315aa)
cation transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F6053E
Ferrous-iron efflux pump FieF {ECO:0000313|EMBL:CEJ15355.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
cation diffusion facilitator family transporter
SCNpilot_cont_500_bf_scaffold_576_28
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31494..31739)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UGQ2_METS4
Signal peptide protein {ECO:0000313|EMBL:EZQ16366.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_576_29
unknown

Not on your lists

comp(31732..32025)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_576_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32022..32222)
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC69400.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying items 1-30 of 41 in total

View Taxonomy