ggKbase home page

SCNpilot_cont_500_bf_scaffold_623

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_623_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..608
DNA (606bp) protein (202aa)
Flagellin domain protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KDW0_METEX
General L-amino acid transport system permease {ECO:0000313|EMBL:KFC67128.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_623_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

658..1050
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NA92_AFIFE
Flagellar protein FlbT {ECO:0000313|EMBL:KFC67127.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
flagellar FlbT family protein; K06601 flagellar protein FlbT
SCNpilot_cont_500_bf_scaffold_623_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1034..1405
DNA (372bp) protein (124aa)
Flagellar FlaF family protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UB63_METS4
Putative flagellar protein FlaF {ECO:0000313|EMBL:KFC67126.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
flagellar FlaF family protein; K06602 flagellar protein FlaF
SCNpilot_cont_500_bf_scaffold_623_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2031..4133
DNA (2103bp) protein (701aa)
Ferrichrysobactin receptor n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X2S8_RHIFR rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:KFC63275.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
fct; ferrichrysobactin receptor rbh
SCNpilot_cont_500_bf_scaffold_623_5
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4166..5374
DNA (1209bp) protein (403aa)
UPI0003CE3514 related cluster n=1 Tax=unknown RepID=UPI0003CE3514 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEC78707.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
Major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_623_6
bacterium YEK0313, Bacteria

Not on your lists

5383..6117
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Halomonas zhanjiangensis RepID=UPI00037C5520
Ferric iron reductase protein FhuF {ECO:0000313|EMBL:CEJ12023.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative iron reductase
SCNpilot_cont_500_bf_scaffold_623_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6159..7739)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P5I8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC67125.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_623_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7747..9612)
DNA (1866bp) protein (622aa)
Flagellar hook-associated protein FlgK n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ITR5_9BRAD
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:KFC67124.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK rbh
SCNpilot_cont_500_bf_scaffold_623_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9672..11075)
DNA (1404bp) protein (468aa)
Flagellar basal body FlaE domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IB71_METNO rbh
Putative flagellar hook protein FlgE {ECO:0000313|EMBL:KFC67123.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
flagellar basal body FlaE domain-containing protein; K02390 flagellar hook protein FlgE rbh
SCNpilot_cont_500_bf_scaffold_623_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11251..12267)
DNA (1017bp) protein (339aa)
TIGR01620 family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z306_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC67122.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K08990 putative membrane protein
SCNpilot_cont_500_bf_scaffold_623_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12281..13726)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D6AC1C
YcjX-like protein {ECO:0000313|EMBL:KFC67121.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K06918 rbh
SCNpilot_cont_500_bf_scaffold_623_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13740..14267)
DNA (528bp) protein (176aa)
sixA; phosphohistidine phosphatase; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000375BEAD
Phosphoglycerate/bisphosphoglycerate mutase {ECO:0000313|EMBL:KFC67120.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_623_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14308..14532)
DNA (225bp) protein (75aa)
Putative transcriptional regulator, XRE family n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TAH0_9BRAD
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:KFC67117.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
XRE family transcriptional regulator; K07727 putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_623_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14542..15114)
DNA (573bp) protein (191aa)
hypothetical protein, partial n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B32DA2
Uncharacterized protein {ECO:0000313|EMBL:KFC67116.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_623_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15193..15804
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G5A9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC67115.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_623_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15894..16511)
DNA (618bp) protein (206aa)
Bacterial regulatory protein, tetR family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QSK4_9CAUL
Transcriptional regulatory protein {ECO:0000313|EMBL:KFC67119.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_623_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16679..17656
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ISE1_BORPD
Uncharacterized protein {ECO:0000313|EMBL:KFC67118.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_623_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17626..17934
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KHJ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFC67118.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_623_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17941..18786)
DNA (846bp) protein (282aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IJ36_METNO rbh
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:KFC67114.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ATPase rbh
SCNpilot_cont_500_bf_scaffold_623_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18956..20791
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E9C624 rbh
Sodium/hydrogen exchanger {ECO:0000313|EMBL:KFC67113.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutathione-dependent cation efflux protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family rbh
SCNpilot_cont_500_bf_scaffold_623_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20727..21845)
DNA (1119bp) protein (373aa)
Glycosyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW66_9RHIZ rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:KFC67112.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
group 1 glycosyl transferase rbh
SCNpilot_cont_500_bf_scaffold_623_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21845..22834)
DNA (990bp) protein (330aa)
ser/threonine protein phosphatase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036D6D75
Uncharacterized protein {ECO:0000313|EMBL:KFC67111.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
metallophosphoesterase
SCNpilot_cont_500_bf_scaffold_623_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22896..23675
DNA (780bp) protein (260aa)
short chain dehydrogenase/reductase family oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000367B3BB rbh
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:KFC67110.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_623_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23796..24719
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F146CB rbh
RarD family protein {ECO:0000313|EMBL:KFC67109.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K15270 S-adenosylmethionine uptake transporter rbh
SCNpilot_cont_500_bf_scaffold_623_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24822..25442
DNA (621bp) protein (207aa)
Putative transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW62_9RHIZ rbh
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KFC67108.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_623_26
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25463..25867
DNA (405bp) protein (135aa)
Cupin domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWK4_9PROT
Cupin domain protein {ECO:0000313|EMBL:EHM02652.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
cupin
SCNpilot_cont_500_bf_scaffold_623_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26309..27475
DNA (1167bp) protein (389aa)
Diguanylate cyclase n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LFZ5_AGRSH rbh
Diguanylate cyclase {ECO:0000313|EMBL:KFC74796.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
diguanylate cyclase rbh
SCNpilot_cont_500_bf_scaffold_623_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27601..28539)
DNA (939bp) protein (313aa)
Cytochrome c, mono-and diheme variants family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW61_9RHIZ rbh
Putative diheme cytochrome c-553 {ECO:0000313|EMBL:KFC67107.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative diheme cytochrome c-553
SCNpilot_cont_500_bf_scaffold_623_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28730..29161)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000302DC08
Cytochrome c, class II {ECO:0000313|EMBL:KFC67106.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cytochrome c precursor
SCNpilot_cont_500_bf_scaffold_623_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29294..31603)
DNA (2310bp) protein (770aa)
aldehyde oxidase/xanthine dehydrogenase; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000303021B rbh
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:KFC67104.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying items 1-30 of 67 in total

View Taxonomy