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SCNpilot_cont_500_bf_scaffold_750

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_750_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1342)
DNA (1341bp) protein (447aa)
DNA segregation ATPase, FtsK/SpoIIIE family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYY1_9RHIZ
DNA segregation ATPase, FtsK/SpoIIIE family {ECO:0000313|EMBL:EIM29173.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_cont_500_bf_scaffold_750_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1504..2859)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037763E0 rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
amtB; ammonia channel; K03320 ammonium transporter, Amt family
SCNpilot_cont_500_bf_scaffold_750_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2888..3226)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYX6_9RHIZ
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KFC68117.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2
SCNpilot_cont_500_bf_scaffold_750_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3462..4331)
DNA (870bp) protein (290aa)
Acyl-CoA thioesterase {ECO:0000313|EMBL:KFC68118.1}; EC=3.1.2.2 {ECO:0000313|EMBL:KFC68118.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acyl-CoA thioesterase II; K10805 acyl-CoA thioesterase II [EC:3.1.2.-]
acyl-CoA thioesterase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F7996E rbh
SCNpilot_cont_500_bf_scaffold_750_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4472..5695
DNA (1224bp) protein (408aa)
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] rbh
2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036387CA rbh
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase {ECO:0000313|EMBL:KFC68119.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_750_6
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5970..6167)
DNA (198bp) protein (66aa)
UPF0434 protein Bind_2731 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJS8_BEII9
hypothetical protein; K09791 hypothetical protein
UPF0434 protein Bind_2731 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_750_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6178..11019)
DNA (4842bp) protein (1614aa)
NAD-glutamate dehydrogenase; K15371 glutamate dehydrogenase [EC:1.4.1.2] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036603D8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC68121.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_750_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11132..11749
DNA (618bp) protein (206aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Uncharacterized peroxidase-related enzyme n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICZ8_METNO rbh
peroxidase-like protein rbh
SCNpilot_cont_500_bf_scaffold_750_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12067..12435
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMV2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC68123.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_750_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12445..12978)
DNA (534bp) protein (178aa)
phosphinothricin acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037AE056
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KFC68124.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_750_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13071..13844)
DNA (774bp) protein (258aa)
membrane protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034B4810 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC68125.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K06890 rbh
SCNpilot_cont_500_bf_scaffold_750_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14064..16652)
DNA (2589bp) protein (863aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU7_9RHIZ rbh
Putative inner membrane protein {ECO:0000313|EMBL:KFC68127.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K02004 putative ABC transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_750_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16655..17356)
DNA (702bp) protein (234aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU6_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC68128.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_750_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17363..18103
DNA (741bp) protein (247aa)
acyl-CoA thioesterase (tesA-like) (EC:3.1.1.2)
Lysophospholipase L1-like esterase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU5_9RHIZ
Putative esterase {ECO:0000313|EMBL:KFC68129.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_750_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18184..19239
DNA (1056bp) protein (352aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU4_9RHIZ rbh
Putative oxidoreductase, NADP(H)-dependent aldo-keto reductase {ECO:0000313|EMBL:KFC68130.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aldo/keto reductase rbh
SCNpilot_cont_500_bf_scaffold_750_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19364..19939
DNA (576bp) protein (192aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003641ECE
SCNpilot_cont_500_bf_scaffold_750_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19936..20232
DNA (297bp) protein (99aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=PHS_BRASO
SCNpilot_cont_500_bf_scaffold_750_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20239..20985)
DNA (747bp) protein (249aa)
Pseudouridine synthase {ECO:0000313|EMBL:KFC68135.1}; EC=5.4.99.- {ECO:0000313|EMBL:KFC68135.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] rbh
Pseudouridine synthase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDT3_METPB rbh
SCNpilot_cont_500_bf_scaffold_750_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21056..22324
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F11F8C rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor rbh
SCNpilot_cont_500_bf_scaffold_750_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22321..22965
DNA (645bp) protein (215aa)
Probable intracellular septation protein A n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U8N1_METS4
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
intracellular septation protein A; K06190 intracellular septation protein
SCNpilot_cont_500_bf_scaffold_750_21
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23034..23447
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NZD4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF43284.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_750_22
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23444..24154
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RUD3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD85560.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_750_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24158..24943)
DNA (786bp) protein (262aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED3F6A rbh
Phosphoribosyl-AMP cyclohydrolase {ECO:0000313|EMBL:KFC62909.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_750_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25124..25498
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMW2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC62910.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_750_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25502..26476)
DNA (975bp) protein (325aa)
alcohol dehydrogenase zinc-binding domain-containing protein; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
NADPH:quinone oxidoreductase n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003820A81 rbh
NADPH2:quinone reductase {ECO:0000313|EMBL:KFC62911.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_750_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26667..27275
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FBCC0E
Uncharacterized protein {ECO:0000313|EMBL:KFC62912.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_750_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27402..28631
DNA (1230bp) protein (410aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003629DC2 rbh
SCNpilot_cont_500_bf_scaffold_750_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28638..29120
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMX0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC62914.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_750_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29124..30860)
DNA (1737bp) protein (579aa)
Gamma-glutamyltransferase {ECO:0000313|EMBL:KFC62915.1}; EC=2.3.2.2 {ECO:0000313|EMBL:KFC62915.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Gamma-glutamyltranspeptidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YU17_9RHIZ
ggt; gamma-glutamyltranspeptidase rbh
SCNpilot_cont_500_bf_scaffold_750_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30988..31590
DNA (603bp) protein (201aa)
LemA family lipoprotein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003783E45
LemA family protein {ECO:0000313|EMBL:KFC62916.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LemA family protein; K03744 LemA protein
Displaying items 1-30 of 57 in total

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