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SCNpilot_cont_500_bf_scaffold_1084

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Displaying items 1-30 of 155 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1084_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1539
DNA (1539bp) protein (513aa)
Putative ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:KFC64116.1}; EC=3.6.3.- {ECO:0000313|EMBL:KFC64116.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000380203F rbh
putative ABC transporter; ATP-binding component rbh
SCNpilot_cont_500_bf_scaffold_1084_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1532..2596
DNA (1065bp) protein (355aa)
sugar ABC transporter permease n=1 Tax=Aureimonas ureilytica RepID=UPI00038111D8
Putative ABC transporter (Permease protein) {ECO:0000313|EMBL:KFC64117.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_1084_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2593..3525
DNA (933bp) protein (311aa)
Ribose transport system permease protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YG17_MOBAS rbh
Putative ABC transporter (Permease protein) {ECO:0000313|EMBL:KFC64118.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative ABC transporter; permease component; K02057 simple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_1084_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3804..4574
DNA (771bp) protein (257aa)
ABC transporter substrate-binding protein n=1 Tax=Leucothrix mucor RepID=UPI0003B4350F
Basic membrane lipoprotein {ECO:0000313|EMBL:KFC64119.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative ABC transporter; periplasmic substrate-binding component
SCNpilot_cont_500_bf_scaffold_1084_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4884..5156
DNA (273bp) protein (91aa)
DNA-binding protein HU n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6ABA8_9PROT
Histone-like DNA-binding protein {ECO:0000313|EMBL:KFC64129.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
SCNpilot_cont_500_bf_scaffold_1084_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5240..6415
DNA (1176bp) protein (392aa)
von Willebrand factor A n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030CB9BA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC64130.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09989 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1084_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6474..7076
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2Z1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC64131.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1084_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7089..7517)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E57001
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1084_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7644..7964)
DNA (321bp) protein (107aa)
2Fe-2S ferredoxin n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000313699C
Ferredoxin {ECO:0000313|EMBL:KFC64134.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
fdxB; 2Fe-2S ferredoxin; K04755 ferredoxin, 2Fe-2S
SCNpilot_cont_500_bf_scaffold_1084_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8077..8415)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036B1C77
UDPglucose 6-dehydrogenase {ECO:0000313|EMBL:KFC64135.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Hpt protein
SCNpilot_cont_500_bf_scaffold_1084_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8684..14776
DNA (6093bp) protein (2031aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036512EA
Uncharacterized protein {ECO:0000313|EMBL:KFG68954.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1084_12
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14871..15602)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X4K4_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL50810.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_1084_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15797..16396)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003675CBF
Putative ABC transporter (Substrate binding protein) {ECO:0000313|EMBL:KFC64136.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1084_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16400..17542)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FD6641 rbh
Mammalian cell entry related protein {ECO:0000313|EMBL:KFC64137.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K02067 putative ABC transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1084_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17545..18399)
DNA (855bp) protein (285aa)
Putative ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:KFC64138.1}; EC=3.6.3.- {ECO:0000313|EMBL:KFC64138.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter related n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IGX5_BEII9 rbh
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1084_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18402..19547)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F1DFE1
Uncharacterized protein {ECO:0000313|EMBL:KFC64139.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K02066 putative ABC transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1084_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19847..20698
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Methylobacterium extorquens RepID=A9W138_METEP
Uncharacterized protein {ECO:0000313|EMBL:KFC64140.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1084_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20724..21596)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000374CBFD rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:KFC64142.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein; K02050 NitT/TauT family transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1084_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21593..22408)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036C6EB9 rbh
ABC transporter related protein {ECO:0000313|EMBL:KFC64143.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nitrate/sulfonate/bicarbonate ABC transporter ATPase; K02049 NitT/TauT family transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1084_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22429..23460)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E6F13 rbh
NitT/TauT family transport system substrate-binding protein {ECO:0000313|EMBL:KFC64144.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1084_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23601..24401
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT43_9RHIZ
Putative amidohydrolase {ECO:0000313|EMBL:KFC64146.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
uncharacterized protein, putative amidase
SCNpilot_cont_500_bf_scaffold_1084_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24403..24858)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L682_9GAMM
Redox-sensitive transcriptional activator SoxR {ECO:0000313|EMBL:KFC64147.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
soxR; redox-sensitive transcriptional activator SoxR
SCNpilot_cont_500_bf_scaffold_1084_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24948..25541
DNA (594bp) protein (198aa)
Putative flavoprotein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQN3_9RHIZ
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KFC64148.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
flavoprotein
SCNpilot_cont_500_bf_scaffold_1084_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25642..26406
DNA (765bp) protein (255aa)
Putative Zn-dependent hydrolase of beta-lactamase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HK62_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC64150.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
beta-lactamase family protein
SCNpilot_cont_500_bf_scaffold_1084_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26549..27661)
DNA (1113bp) protein (371aa)
Putative malonyl-CoA decarboxylase (MCD) {ECO:0000313|EMBL:KFC64152.1}; EC=4.1.1.9 {ECO:0000313|EMBL:KFC64152.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
malonyl-CoA decarboxylase; K01578 malonyl-CoA decarboxylase [EC:4.1.1.9]
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M8V4_9RHIZ
SCNpilot_cont_500_bf_scaffold_1084_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27727..28992)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003770A6A
Uncharacterized protein {ECO:0000313|EMBL:KFC64153.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Hrp-dependent type III effector protein
SCNpilot_cont_500_bf_scaffold_1084_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29276..30793
DNA (1518bp) protein (506aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL37_9RHIZ rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFC64154.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular solute-binding protein, family 5 middle family protein 14; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1084_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30814..31758
DNA (945bp) protein (315aa)
Peptide ABC transporter n=2 Tax=Labrenzia RepID=U7GH36_9RHOB
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:KFC64155.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
substrate-binding transmembrane component of ABC transporter; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_1084_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31758..32636
DNA (879bp) protein (293aa)
Transmembrane permease component of ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU39_9RHIZ
Putative ABC transporter permease protein dipeptide transport protein {ECO:0000313|EMBL:KFC64156.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dipeptide transport system permease dppC; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_1084_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32669..34468
DNA (1800bp) protein (600aa)
Putative gamma-glutamyltranspeptidase {ECO:0000313|EMBL:KFC64157.1}; EC=2.3.2.2 {ECO:0000313|EMBL:KFC64157.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Gamma-glutamyltranspeptidase (EC:2.3.2.2) rbh
UPI0003D5D563 related cluster n=1 Tax=unknown RepID=UPI0003D5D563 rbh
Displaying items 1-30 of 155 in total

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