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SCNpilot_cont_500_bf_scaffold_1179

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1179_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..890)
DNA (888bp) protein (296aa)
Putative dihydrodipicolinate synthetase {ECO:0000313|EMBL:KFC70094.1}; EC=4.3.3.7 {ECO:0000313|EMBL:KFC70094.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037BE798 rbh
SCNpilot_cont_500_bf_scaffold_1179_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(874..2337)
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000306FC36 rbh
Putative D-lactate dehydrogenase {ECO:0000313|EMBL:KFC70095.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
D-lactate dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_1179_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2341..3024)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312053F rbh
Hydantoin racemase {ECO:0000313|EMBL:KFC70096.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Asp/Glu racemase
SCNpilot_cont_500_bf_scaffold_1179_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3021..3683)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D840B8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC70097.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
flavin reductase-like protein
SCNpilot_cont_500_bf_scaffold_1179_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3688..4863)
DNA (1176bp) protein (392aa)
N-carbamoyl-L-amino acid hydrolase {ECO:0000313|EMBL:KFC70098.1}; EC=3.5.1.87 {ECO:0000313|EMBL:KFC70098.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amaB2; allantoate amidohydrolase (EC:3.5.1.-); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87]
N-carbamoyl-L-amino acid hydrolase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4THR0_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1179_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4869..6218)
DNA (1350bp) protein (450aa)
Dihydroorotase, multifunctional complex type {ECO:0000313|EMBL:KFC70099.1}; EC=3.5.2.5 {ECO:0000313|EMBL:KFC70099.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Allantoinase (EC:3.5.2.5) rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037A1F25 rbh
SCNpilot_cont_500_bf_scaffold_1179_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6263..7360)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HNG5_ACHXA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC70100.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09703 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1179_8
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7475..8395
DNA (921bp) protein (307aa)
Putative transcriptional regulatory protein, LysR family occR-like n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SYQ4_9BRAD rbh
Putative transcriptional regulatory protein, LysR family occR-like {ECO:0000313|EMBL:CCD96289.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_1179_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8539..9414
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031A777B rbh
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:KFC70101.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polar amino acid ABC transporter
SCNpilot_cont_500_bf_scaffold_1179_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9426..10175
DNA (750bp) protein (250aa)
ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DBF351 rbh
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:KFC70102.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1179_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10185..10859
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DC746F rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC70103.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutamine ABC transporter membrane protein; K02029 polar amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_1179_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10859..11533
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031B3D12 rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC70104.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_1179_13
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11555..12466)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035C868F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI93715.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;"
SCNpilot_cont_500_bf_scaffold_1179_14
bacterium YEK0313, Bacteria

Not on your lists

comp(12476..13423)
DNA (948bp) protein (316aa)
N-carbamoyl-D-amino acid hydrolase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZZ38_9BRAD rbh
N-carbamoyl-D-amino acid hydrolase {ECO:0000313|EMBL:CEJ12025.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
N-carbamoyl-D-amino acid hydrolase rbh
SCNpilot_cont_500_bf_scaffold_1179_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13720..14685
DNA (966bp) protein (322aa)
ribokinase-like domain-containing protein; K00847 fructokinase [EC:2.7.1.4] rbh
PfkB domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7II15_XANP2 rbh
PfkB domain protein {ECO:0000313|EMBL:ABS67658.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_1179_16
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14798..15277
DNA (480bp) protein (160aa)
MarR family transcriptional regulator n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003607B25
Transcriptional regulator slyA {ECO:0000313|EMBL:CDM58895.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1179_17
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15456..16550
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PQ04_9BRAD
Hemolysin secretion protein D {ECO:0000313|EMBL:EWY38548.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
secretion protein HlyD; K03543 multidrug resistance protein A
SCNpilot_cont_500_bf_scaffold_1179_18
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16562..18115
DNA (1554bp) protein (518aa)
DSBA oxidoreductase n=1 Tax=Rhizobium loti RepID=UPI00037F25F2
Drug resistance MFS transporter, drug:H+ antiporter-1 family protein {ECO:0000313|EMBL:AID33686.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
drug resistance transporter, EmrB/QacA subfamily
SCNpilot_cont_500_bf_scaffold_1179_19
unknown

Not on your lists

18294..18518
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1179_20
unknown

Not on your lists

18692..19243
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1179_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19255..20709)
DNA (1455bp) protein (485aa)
polyprenyl glycosylphosphotransferase n=1 Tax=Methylocystis parvus RepID=UPI0002E2F693
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:KFC70817.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
SCNpilot_cont_500_bf_scaffold_1179_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20908..21282)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PN35_RHIML
Uncharacterized protein {ECO:0000313|EMBL:KIZ42488.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
membrane protein
SCNpilot_cont_500_bf_scaffold_1179_23
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21491..22240
DNA (750bp) protein (250aa)
Aspartate racemase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YAV3_9BRAD rbh
Aspartate racemase {ECO:0000313|EMBL:EHR05300.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1179_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22419..23813
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNC9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM25471.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1179_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23828..25558)
DNA (1731bp) protein (577aa)
ilvD2; dihydroxy-acid dehydratase IlvD (EC:4.2.1.9) rbh
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EF03D rbh
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:KFC66770.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1179_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25628..26656)
DNA (1029bp) protein (343aa)
Putative nucleotide sugar epimerase Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:KFC66765.1}; EC=5.1.3.- {ECO:0000313|EMBL:KFC66765.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
wcaG; nucleoside-diphosphate-sugar epimerase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
Predicted Nucleoside-diphosphate-sugar epimerase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P6P4_AROAE
SCNpilot_cont_500_bf_scaffold_1179_27
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26772..28193)
DNA (1422bp) protein (474aa)
phosphoglucomutase/phosphomannomutase subunit alpha/beta; K01840 phosphomannomutase [EC:5.4.2.8]
Phosphomannomutase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQ05_9RHIZ
Phosphomannomutase {ECO:0000313|EMBL:KFG69883.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_500_bf_scaffold_1179_28
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28448..28837
DNA (390bp) protein (130aa)
rkpK; UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) n=2 Tax=Rhizobium RepID=U4QBJ5_9RHIZ
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:EKJ96261.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;"
Displaying 28 items

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