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SCNpilot_cont_500_bf_scaffold_1556

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1556_1
unknown

Not on your lists

comp(3..194)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1556_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(332..778)
DNA (447bp) protein (149aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7D2_STAND
SCNpilot_cont_500_bf_scaffold_1556_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(775..1740)
DNA (966bp) protein (322aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
homoserine kinase (EC:2.7.1.39); K02204 homoserine kinase type II [EC:2.7.1.39] rbh
homoserine kinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003161BCD
SCNpilot_cont_500_bf_scaffold_1556_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1762..2733)
DNA (972bp) protein (324aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003819D09 rbh
SCNpilot_cont_500_bf_scaffold_1556_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2845..3342
DNA (498bp) protein (166aa)
Probable transcriptional regulator protein, MarR family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J0J7_POLGS
MarR family transcriptional regulator
Probable transcriptional regulator protein, MarR family {ECO:0000313|EMBL:ADZ69665.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_1556_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3688..3954
DNA (267bp) protein (89aa)
glutathione S-transferase domain protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH91_PHEZH
Glutathione S-transferase {ECO:0000313|EMBL:EYF04441.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCNpilot_cont_500_bf_scaffold_1556_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4080..5942
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000311A8F7 rbh
Sodium/hydrogen exchanger {ECO:0000313|EMBL:KFC75286.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
potassium efflux system protein; K11747 glutathione-regulated potassium-efflux system protein KefB rbh
SCNpilot_cont_500_bf_scaffold_1556_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6075..6950
DNA (876bp) protein (292aa)
UPI0003D01CDC related cluster n=1 Tax=unknown RepID=UPI0003D01CDC
Uncharacterized protein {ECO:0000313|EMBL:KFC75288.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1556_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6987..8882)
DNA (1896bp) protein (632aa)
Methyl-accepting chemotaxis protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EJ27_CAUCE
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:KFC75289.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Methyl-accepting chemotaxis protein
SCNpilot_cont_500_bf_scaffold_1556_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9042..9416)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030F1678
Uncharacterized protein {ECO:0000313|EMBL:KFC75290.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1556_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9567..10472
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000316DCBB rbh
Transcriptional regulator {ECO:0000313|EMBL:KFC75291.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_1556_12
unknown

Not on your lists

comp(10534..10710)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1556_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10800..13010)
DNA (2211bp) protein (737aa)
glutamate/cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F0C92A rbh
Glutamate-cysteine ligase {ECO:0000313|EMBL:KFC75293.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1556_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13203..13682
DNA (480bp) protein (160aa)
signal peptide protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI000364BD32
Uncharacterized protein {ECO:0000313|EMBL:KFC75296.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative signal peptide
SCNpilot_cont_500_bf_scaffold_1556_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13701..14669
DNA (969bp) protein (323aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] rbh
4-hydroxybenzoate polyprenyl transferase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IB13_METNO rbh
SCNpilot_cont_500_bf_scaffold_1556_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14666..15187)
DNA (522bp) protein (174aa)
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036EA7CD
Uncharacterized protein {ECO:0000313|EMBL:KFC75298.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1556_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15436..16260
DNA (825bp) protein (275aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] rbh
Inositol monophosphatase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LYE3_METRJ rbh
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:KFC75299.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1556_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16314..16589
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZS1_STAND
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:KFC75300.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1556_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16732..17478
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV25_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC75301.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09778 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1556_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17475..18779
DNA (1305bp) protein (435aa)
3-deoxy-D-manno-octulosonic-acid transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003159123 rbh
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:KFC75302.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1556_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18779..19798
DNA (1020bp) protein (340aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
tetraacyldisaccharide 4''''-kinase n=1 Tax=Xanthobacteraceae RepID=UPI00036EEA7C rbh
SCNpilot_cont_500_bf_scaffold_1556_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19769..19990)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EL61_METSB
Uncharacterized protein {ECO:0000313|EMBL:KFC75304.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1556_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20067..20912
DNA (846bp) protein (282aa)
Dienelactone hydrolase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQT9_METS4
Dienelactone hydrolase {ECO:0000313|EMBL:KFC75305.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dienelactone hydrolase
SCNpilot_cont_500_bf_scaffold_1556_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20950..22542)
DNA (1593bp) protein (531aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] rbh
Exodeoxyribonuclease 7 large subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV21_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1556_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22636..23913
DNA (1278bp) protein (426aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphoribosylamine/glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
phosphoribosylamine--glycine ligase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003083462 rbh
SCNpilot_cont_500_bf_scaffold_1556_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23946..24860
DNA (915bp) protein (305aa)
alpha/beta hydrolase; K01561 haloacetate dehalogenase [EC:3.8.1.3]
Alpha/beta hydrolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I6B5_AZOC5
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:KFC75308.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1556_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24888..25766
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031313BE
Putative esterase of the alpha-beta hydrolase superfamily protein {ECO:0000313|EMBL:KFC75309.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
patatin; K07001 NTE family protein
SCNpilot_cont_500_bf_scaffold_1556_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25726..26487)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00036DD8A7
Putative transcriptional regulator {ECO:0000313|EMBL:KFC75310.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1556_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26593..27336
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQ76_AZOBR
Putative membrane protein {ECO:0000313|EMBL:KFC75311.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1556_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27438..27689
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC72768.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying items 1-30 of 57 in total

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