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SCNpilot_cont_500_bf_scaffold_369_112

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 49 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 107975..108559

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHN0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 192.0
  • Bit_score: 290
  • Evalue 9.20e-76
TetR family transcriptional regulator {ECO:0000313|EMBL:ESX76744.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 192.0
  • Bit_score: 290
  • Evalue 1.30e-75
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 191.0
  • Bit_score: 282
  • Evalue 1.30e-73

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGCCACCGCATCCACGACCTCCGACGACATCTTGCGATGCACCCGCTCCCTGATCGTTCAGGGTGGCTACAACGGCTTCAGCTATGCCGATGTCGCCAAGGTCGTCGGCATTCGCAACGCCAGCATTCACCACCATTTCCCCGGCAAGTCGGATCTGGTCCGCGCGCTCGTTGCGCGGCATCGCGAGCAGTCGGAGGCCGGACTCGCTAATCTGGAGCGGCATGTGTCGGACCCCGTCGAGCAGTTGCAGGCCTATATCGGCCACTGGGAAGCCTGCATCGGCGACGCATCCGCTTCCTTCTGCCTCTGCGCCCTCCTCGCCGGCGAAATCCCCGTCCTGCCCGAGGACGTCGTCGTCGAGGTGCGGGCCTATTTCCGTTCTCTTTCAGGCTGGCTGACATCGGTTCTGGTACGCGGCGCCGATCTCGGCCGCCTGCGGCTCACCGGCTCTGCCCGCGATGAAGCCGAGATCTTCATGGCCACCGTCCACGGCGCCATGCTGTCCGCCCGCGCCTATGGCGATCCCGGCATGTTCGGCGCCATCACGCGCCCGATCCTGCAGCGGATCGTTCCGCCGCACTGA
PROTEIN sequence
Length: 195
MATASTTSDDILRCTRSLIVQGGYNGFSYADVAKVVGIRNASIHHHFPGKSDLVRALVARHREQSEAGLANLERHVSDPVEQLQAYIGHWEACIGDASASFCLCALLAGEIPVLPEDVVVEVRAYFRSLSGWLTSVLVRGADLGRLRLTGSARDEAEIFMATVHGAMLSARAYGDPGMFGAITRPILQRIVPPH*