ggKbase home page

SCNpilot_cont_500_bf_scaffold_1123_29

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 49 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 27234..27848

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003777166 similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 206.0
  • Bit_score: 251
  • Evalue 8.50e-64
Cold shock protein CspB {ECO:0000313|EMBL:KFC74351.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 205.0
  • Bit_score: 358
  • Evalue 9.00e-96
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 206.0
  • Bit_score: 246
  • Evalue 8.60e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGACCGACGAATTCGGTGAGAGCGGGCGGCCACCGATGGGTCCGATTCAATCACTCAACCGCATCGTGCGGCTCGACGGCTCCGGTCAGGGGACGGCCGAGGTCGCCATCGAGATCGCCGGATACGTCAAGTGGTTCGACGTCTCGAAAGGCTACGGCTTCGTGGTTCCCGAGACCGGCGGGGCGGATATCCTGCTCCATGTCACCATCCTGAAACGTGACGGATTCAACGCGATAGCCGAAGGTGCTCGCATCGTGCTCGAAGCGGTGGAGAAGGCGCGCGGGCGCCAGGCCGTTCGCGTTCTCTCGATCGACACCACGGTTGCCCGGCATCCTTCCGAAATGCCGCTCGCCCGCACCAACGTCTCCGTCGCCGCGACCAGCGGGCTGGAACGCATGGTGGTGAAGTGGTTCAACCGGCTGCGCGGTTTCGGCTTCGTTTCGAAGGGCGAGGGCGCGCCCGATGTCTTCGTGCACATGGAAACGCTGCGCCGCTACGGGCTCGTCGAGCTGATCCCCGGCCAGACCGTTCTGGTGCGCTACGGGCCGGGACCGAAGGGGCTGATGGCAGCCGAGATTCGCCTGGAGTCGGGCGGGGTCGCCGCCGCGCACTGA
PROTEIN sequence
Length: 205
MTDEFGESGRPPMGPIQSLNRIVRLDGSGQGTAEVAIEIAGYVKWFDVSKGYGFVVPETGGADILLHVTILKRDGFNAIAEGARIVLEAVEKARGRQAVRVLSIDTTVARHPSEMPLARTNVSVAATSGLERMVVKWFNRLRGFGFVSKGEGAPDVFVHMETLRRYGLVELIPGQTVLVRYGPGPKGLMAAEIRLESGGVAAAH*