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SCNpilot_cont_500_bf_scaffold_1123

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1123_1
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1347
DNA (1347bp) protein (449aa)
Outer membrane autotransporter barrel n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3K9Y0_9RHIZ rbh
Outer membrane autotransporter barrel {ECO:0000313|EMBL:EMG51649.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
outer membrane autotransporter barrel domain-containing protein 6
SCNpilot_cont_500_bf_scaffold_1123_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1554..2546)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003696A3C
Mg2+ transporter protein, CorA-like protein {ECO:0000313|EMBL:KFC67476.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Mg2 transporter protein CorA family protein; K16074 zinc transporter
SCNpilot_cont_500_bf_scaffold_1123_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2636..3598)
DNA (963bp) protein (321aa)
Lysozyme M1 (1,4-beta-N-acetylmuramidase) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKP7_9RHIZ
Glycoside hydrolase, family 25 {ECO:0000313|EMBL:KFC67475.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glycoside hydrolase family protein; K07273 lysozyme
SCNpilot_cont_500_bf_scaffold_1123_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3745..4722)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036C0B01 rbh
Glycoside hydrolase, family 25 {ECO:0000313|EMBL:KFC67474.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glycoside hydrolase family protein; K07273 lysozyme rbh
SCNpilot_cont_500_bf_scaffold_1123_trna_2
unknown

Not on your lists

comp(4897..4978)
DNA (82bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1123_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5104..5373)
DNA (270bp) protein (90aa)
Surface presentation of antigens (SPOA) protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IAQ3_METNO
Surface presentation of antigens (SPOA) protein {ECO:0000313|EMBL:KFC67472.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
surface presentation of antigens (SPOA) protein; K02417 flagellar motor switch protein FliN/FliY
SCNpilot_cont_500_bf_scaffold_1123_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5510..6214
DNA (705bp) protein (235aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea s
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] rbh
Octanoyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKP9_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1123_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6282..6482
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC67470.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1123_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6595..8202
DNA (1608bp) protein (536aa)
Putative acyl-CoA carboxylase, beta chain {ECO:0000313|EMBL:KFC67469.1}; EC=6.4.1.- {ECO:0000313|EMBL:KFC67469.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
carboxyl transferase (EC:6.4.1.3); K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] rbh
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKQ1_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1123_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8293..8676)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FT68_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX82867.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1123_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8918..9721
DNA (804bp) protein (268aa)
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] rbh
Dienelactone hydrolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HU79_AZOC5 rbh
Dienelactone hydrolase {ECO:0000313|EMBL:BAF86914.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_1123_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9844..10605
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F3E846
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KFC67466.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
short-chain alcohol dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_1123_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10703..11389
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UND6_METS4
Cation efflux protein {ECO:0000313|EMBL:KFC67465.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1123_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11421..13406
DNA (1986bp) protein (662aa)
carbamoyl-phosphate synthase L chain ATP-binding; K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
carbamoyl-phosphate synthase subunit L n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000305F6C9 rbh
3-methylcrotonyl-CoA carboxylase alpha subunit {ECO:0000313|EMBL:KFC67464.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1123_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13560..14405)
DNA (846bp) protein (282aa)
Streptomycin 6-kinase n=1 Tax=Caulobacter sp. AP07 RepID=J2GLE3_9CAUL
L-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:KFC67463.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative streptomycin phosphotransferase
SCNpilot_cont_500_bf_scaffold_1123_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14402..15169)
DNA (768bp) protein (256aa)
short chain dehydrogenase (EC:1.-.-.-)
short-chain dehydrogenase n=1 Tax=Diplorickettsia massiliensis RepID=UPI00029B32FD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KFC67462.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1123_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15204..15560
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7V9M2_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP79261.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
putative glyoxylase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_500_bf_scaffold_1123_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15626..16063
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F96FC5
Uncharacterized protein {ECO:0000313|EMBL:KFC67461.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1123_18
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16090..16590)
DNA (501bp) protein (167aa)
transcriptional regulator, MarR family protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI000288251E
Transcriptional regulator {ECO:0000313|EMBL:KJC56876.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1123_19
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16596..17063)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI00028803EB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB25599.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
SCNpilot_cont_500_bf_scaffold_1123_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17258..18106)
DNA (849bp) protein (283aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094320}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
panC; pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1]
Pantothenate synthetase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PANC_NITHX
SCNpilot_cont_500_bf_scaffold_1123_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18140..18946
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z219_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC67459.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1123_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18943..19662
DNA (720bp) protein (240aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLA2_9RHIZ
Exodeoxyribonuclease III {ECO:0000313|EMBL:KFC67458.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
heat shock protein DnaJ domain-containing protein
SCNpilot_cont_500_bf_scaffold_1123_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19718..21373)
DNA (1656bp) protein (552aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:KFC67457.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KFC67457.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
serine-type D-Ala-D-Ala carboxypeptidase; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] rbh
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLA3_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1123_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21665..22012
DNA (348bp) protein (116aa)
phasin family protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E2B60
Phasin family protein {ECO:0000313|EMBL:KFC67455.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phasin family protein
SCNpilot_cont_500_bf_scaffold_1123_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22947..24476
DNA (1530bp) protein (510aa)
Putative D-galactarate dehydratase/Altronate hydrolase {ECO:0000313|EMBL:KFC74347.1}; EC=4.2.1.42 {ECO:0000313|EMBL:KFC74347.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
D-galactarate dehydratase/Altronate hydrolase domain-containing protein (EC:4.2.1.42); K01685 altronate hydrolase [EC:4.2.1.7]
Altronate dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLI4_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1123_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24582..24974
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halomonas titanicae BH1 RepID=L9UBS2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFC74348.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DoxX family protein
SCNpilot_cont_500_bf_scaffold_1123_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24985..26163)
DNA (1179bp) protein (393aa)
aspC4; aspartate aminotransferase AspC (EC:2.6.1.1)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031D7B55 rbh
Aminotransferase class I {ECO:0000313|EMBL:KFC74349.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1123_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26168..27061
DNA (894bp) protein (298aa)
NAD-dependent protein deacetylase {ECO:0000313|EMBL:KFC74350.1}; EC=3.5.1.- {ECO:0000313|EMBL:KFC74350.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
NAD-dependent protein deacetylase, SIR2 family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YY27_9RHIZ
SCNpilot_cont_500_bf_scaffold_1123_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27234..27848
DNA (615bp) protein (205aa)
cold-shock protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003777166
Cold shock protein CspB {ECO:0000313|EMBL:KFC74351.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
Displaying items 1-30 of 118 in total

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