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SCNpilot_cont_500_bf_scaffold_5793_11

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 49 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 8272..10131

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=53254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea thiooxidans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 662.0
  • Bit_score: 1155
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 665.0
  • Bit_score: 1021
  • Evalue 9.80e-296
DNA-directed RNA polymerase subunit beta n=2 Tax=Bosea thiooxidans RepID=Q6XBL2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 662.0
  • Bit_score: 1155
  • Evalue 0.0

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Taxonomy

Bosea thiooxidans → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1860
ATGGAAGCGGTCGTCGCCCGTGACTCGGGCGCCGCGATCGCGGCCCGCCGCGCCGGCATCGTCGATCAGGTCGACGCGACCCGTATCGTCATCCGCGCCTCGGGCGAGACCGACCCGACCAAGCCGGGCGTCGACATCTACCGGCTGCAGAAGTTCCAGCGCTCGAACCAGTCGACCTGCATCACGCAGCGTCCGCTGGTGCGCGTCGGCGACGTCGTCAAGAAGGGCGATATCGTCGCGGACGGCCCGTCGACCGAGTTCGGCGAGCTCGCGCTCGGCCGCAACGTGCTCGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCGATCCTTCTCTCCGAGAAGATCGTCTCCGAGGACGTCTTCACCTCGATCCATATCGAGGAGTTCGAGGTCATGGCCCGCGACACCAAGCTGGGTCCTGAGGAAATCACGCGCGACATTCCGAACGTCTCGGAAGAGGCGCTGAAGAACCTCGACGAAGCCGGTATCGTCTATATCGGCGCCGAGGTGGCTGCGGGCGACATCCTCGTCGGCAAGATCACGCCGAAGGGCGAGAGCCCGATGACGCCTGAAGAGAAGCTGCTGCGCGCCATCTTCGGCGAGAAGGCTTCGGACGTTCGCGACACCTCGCTGCGGGTTCCGCCCGGCGTGCAGGGCACGATCGTCGAGGTCCGCGTGTTCAACCGCCACGGCGTCGACAAGGACGAGCGCGCCCAGGCGATCGAGCGCGAGGAGATCGAGCGTCTCGCCAAGGACCGCGACGACGAGCAGGCGATCCTGGACCGCAACACCTTCGCGCGTCTGGCCGAGATCCTGACCGGCAAGACCGGGCTGGCCGGCCCGAAGGGCTTCAAGAAGGACACGGTTATCACCCGCGAGGTGATGAGCGAGTTCCCGCGTTCGCAGTGGTGGCTGTTCGCGACCGCCGAAGACTCGCTGATGACCGAGATCGAGGCGATGCGGAAGCAGTACGACGAGTCGAAGAAGCGCCTCGAGCAGCGCTTCCTCGACAAGGTCGAGAAGCTGCAGCGCGGCGACGAGCTGCCCCCGGGCGTGATGAAGATGGTCAAGGTCTTCGTCGCGGTGAAGCGCAAGATCCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCACCCATGCCGACATCGTGCTGAACCCGCTCGGCGTGCCCTCGCGCATGAATGTCGGCCAGATCCTGGAAACCCATCTGGGCTGGGCTGCCGCCGGTCTCGGCAAGCAGATCTCGAAGGCTCTCGACGCCTACAAGAAGTCCAACGACTTCAAGGCGCTGAAGGCCGAGTTCGACGCCGTTTACGAGGATAACGAGATCATCGCCTCGATGGACGAGAACGAACTCGTCGAGATGGGCCAGAACCTGCGCCGCGGCGTTCCCGTCGCGACCCCGGTGTTCAACGGCGCCAAGGAAGCCGATATCGAGCGGCTGCTGGAGCAGGCCGGCCTGCATAGCTCTGGTCAGTCGACCCTCTATGACGGCCGCACGGGTGAGCCTTTCGACCGCAAGGTGACGATGGGCTACATCTACATGCTCAAGCTGCACCACCTGGTCGACGACAAGATCCATGCCCGTTCGATCGGCCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAAATGGAGGTCTGGGGCCGTACCAAGGTCTACGAGTCGATCGTGCGCGGCGAGGACAACTTCGAGGCAGGCATCCCCGAGAGCTTCAACGTTCTCGTCAAGGAGATGCGCTCGCTCGGCCTCAACGTCGAGCTGATCAACAACAAGGTGAAGCCGGGCGAATTGCCGCCGGCCGAAGCGGCCGAATAA
PROTEIN sequence
Length: 620
MEAVVARDSGAAIAARRAGIVDQVDATRIVIRASGETDPTKPGVDIYRLQKFQRSNQSTCITQRPLVRVGDVVKKGDIVADGPSTEFGELALGRNVLVAFMPWNGYNFEDSILLSEKIVSEDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVAAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERAQAIEREEIERLAKDRDDEQAILDRNTFARLAEILTGKTGLAGPKGFKKDTVITREVMSEFPRSQWWLFATAEDSLMTEIEAMRKQYDESKKRLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGTHADIVLNPLGVPSRMNVGQILETHLGWAAAGLGKQISKALDAYKKSNDFKALKAEFDAVYEDNEIIASMDENELVEMGQNLRRGVPVATPVFNGAKEADIERLLEQAGLHSSGQSTLYDGRTGEPFDRKVTMGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWGRTKVYESIVRGEDNFEAGIPESFNVLVKEMRSLGLNVELINNKVKPGELPPAEAAE*