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SCNpilot_cont_500_bf_scaffold_5793_12

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 49 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 10242..10523

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 93.0
  • Bit_score: 195
  • Evalue 4.60e-47
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 93.0
  • Bit_score: 179
  • Evalue 5.90e-43
DNA-directed RNA polymerase subunit beta' n=4 Tax=Methylobacterium extorquens RepID=RPOC_METC4 similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 93.0
  • Bit_score: 179
  • Evalue 1.90e-42

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGAAGCAAGAGGTCATGAACCTTTTCGGCCAGCAGCCGGTCCAGCAGGCCTTCGACGCGATCAAGATCTCGATCGCGAGCCCGGAGAAGATCCTGTCCTGGTCCTATGGCGAGATCAAAAAGCCGGAGACCATCAACTACCGCACGTTCAAGCCGGAGCGTGACGGCCTGTTCTGCGCGCGCATCTTCGGGCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCATGAAGTTCAAGGGCGTCATCTGCGAGAAGTGCGGCGTCGAAGCCTGA
PROTEIN sequence
Length: 94
MKQEVMNLFGQQPVQQAFDAIKISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKFKGVICEKCGVEA*