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SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

SCNPILOT_CONT_500_BF_Bosea_sp__LC85_67_17
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Bosea sp. LC85  →  Bosea  →  Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 109 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_44160
Species: Bosea sp. LC85 (100%)
1 1446 bp 70.40 19.36 89.21
SCNpilot_cont_500_bf_scaffold_38287
Species: Mesorhizobium alhagi (50%)
2 1619 bp 68.56 15.75 98.58
SCNpilot_cont_500_bf_scaffold_37624
Species: Bosea sp. LC85 (66.67%)
3 1644 bp 66.79 18.10 94.53
SCNpilot_cont_500_bf_scaffold_26139
Species: Bosea sp. LC85 (100%)
3 2189 bp 66.01 19.19 100.18
SCNpilot_cont_500_bf_scaffold_25661
Species: Rhizobium tropici (66.67%)
3 2220 bp 65.14 13.29 82.84
SCNpilot_cont_500_bf_scaffold_20791
Species: Bosea sp. LC85 (100%)
3 2603 bp 68.77 19.40 100.04
SCNpilot_cont_500_bf_scaffold_24449
Species: Bosea sp. LC85 (50%)
4 2805 bp 61.07 16.84 58.50
SCNpilot_cont_500_bf_scaffold_18520
Species: Bosea sp. LC85 (100%)
3 2832 bp 67.87 20.92 95.13
SCNpilot_cont_500_bf_scaffold_18124
Order: Rhizobiales (75%)
4 2878 bp 66.78 17.20 98.92
SCNpilot_cont_500_bf_scaffold_18021
Order: Rhizobiales (60%)
5 2891 bp 64.44 15.39 72.43
SCNpilot_cont_500_bf_scaffold_17774
Order: Rhizobiales (50%)
4 2922 bp 67.32 15.40 92.30
SCNpilot_cont_500_bf_scaffold_15398
Species: Bosea sp. LC85 (100%)
3 3244 bp 67.66 18.11 90.91
SCNpilot_cont_500_bf_scaffold_13923
Species: Bosea sp. LC85 (100%)
2 3495 bp 63.69 18.45 68.33
SCNpilot_cont_500_bf_scaffold_13866
Species: Bosea sp. LC85 (66.67%)
3 3506 bp 66.80 17.18 95.92
SCNpilot_cont_500_bf_scaffold_13674
Species: Bosea sp. LC85 (75%)
4 4035 bp 66.86 15.12 82.75
SCNpilot_cont_500_bf_scaffold_14147
Order: Rhizobiales (100%)
5 4040 bp 66.83 15.59 89.78
SCNpilot_cont_500_bf_scaffold_10734
Species: Acetobacteraceae bacterium AT-5844 (50%)
4 4229 bp 64.79 14.96 94.35
SCNpilot_cont_500_bf_scaffold_10573
Species: Sodalis praecaptivus (50%)
4 4276 bp 65.79 13.91 92.40
SCNpilot_cont_500_bf_scaffold_10007
Order: Rhizobiales (100%)
5 4447 bp 61.79 6.97 83.04
SCNpilot_cont_500_bf_scaffold_17059
Species: Bosea sp. LC85 (50%)
6 4938 bp 66.20 17.77 84.93
SCNpilot_cont_500_bf_scaffold_14451
Species: Bosea sp. LC85 (83.33%)
6 6103 bp 64.62 14.99 75.91
SCNpilot_cont_500_bf_scaffold_6563
Species: Bosea sp. LC85 (100%)
7 6108 bp 65.09 13.71 92.53
SCNpilot_cont_500_bf_scaffold_12658
Species: Bosea sp. LC85 (66.67%)
6 6643 bp 66.87 14.75 92.04
SCNpilot_cont_500_bf_scaffold_5839
Species: Bosea sp. LC85 (63.64%)
11 6724 bp 69.17 19.59 80.07
SCNpilot_cont_500_bf_scaffold_6608
Order: Rhizobiales (60%)
10 7022 bp 66.49 19.97 86.68
SCNpilot_cont_500_bf_scaffold_5525
Species: Bosea sp. LC85 (75%)
8 7620 bp 66.96 17.95 95.39
SCNpilot_cont_500_bf_scaffold_12505
Species: Bosea sp. LC85 (85.71%)
7 7950 bp 67.07 14.87 86.98
SCNpilot_cont_500_bf_scaffold_4652
Phylum: Proteobacteria (85.71%)
7 8119 bp 58.80 13.24 83.14
SCNpilot_cont_500_bf_scaffold_4540
Species: Bosea sp. LC85 (87.5%)
8 8278 bp 66.13 16.40 90.38
SCNpilot_cont_500_bf_scaffold_7073
Class: Alphaproteobacteria (70%)
10 8877 bp 58.93 11.29 85.50
SCNpilot_cont_500_bf_scaffold_7475
Species: Bosea sp. LC85 (100%)
10 9153 bp 68.26 16.72 93.38
SCNpilot_cont_500_bf_scaffold_4339
Species: Bosea sp. LC85 (70%)
10 11061 bp 65.31 16.59 85.79
SCNpilot_cont_500_bf_scaffold_6534
Species: Bosea sp. LC85 (63.64%)
11 11681 bp 67.03 16.59 95.75
SCNpilot_cont_500_bf_scaffold_10369
Species: Bosea sp. LC85 (66.67%)
15 12366 bp 66.28 16.76 90.30
SCNpilot_cont_500_bf_scaffold_4692
Species: Bosea sp. LC85 (84.62%)
13 12515 bp 67.34 17.14 89.05
SCNpilot_cont_500_bf_scaffold_5607
Order: Rhizobiales (55.56%)
9 12601 bp 66.56 14.21 87.33
SCNpilot_cont_500_bf_scaffold_2630
Species: Bosea sp. LC85 (75%)
16 12993 bp 66.97 13.56 94.20
SCNpilot_cont_500_bf_scaffold_2562
Species: Bosea sp. LC85 (85.71%)
14 13273 bp 66.75 17.38 91.49
SCNpilot_cont_500_bf_scaffold_3197
Species: Bosea sp. LC85 (100%)
11 13374 bp 67.69 16.95 97.82
SCNpilot_cont_500_bf_scaffold_2370
Species: Bosea sp. LC85 (66.67%)
9 14051 bp 68.51 18.25 93.62
SCNpilot_cont_500_bf_scaffold_3540
Species: Bosea sp. LC85 (84.62%)
13 15023 bp 68.95 17.56 89.18
SCNpilot_cont_500_bf_scaffold_2138
Species: Bosea sp. LC85 (75%)
16 15228 bp 68.60 14.36 94.11
SCNpilot_cont_500_bf_scaffold_2988
Species: Bosea sp. LC85 (85.71%)
21 15454 bp 67.36 12.93 86.77
SCNpilot_cont_500_bf_scaffold_2092
Order: Rhizobiales (71.43%)
14 15496 bp 66.66 16.52 85.53
SCNpilot_cont_500_bf_scaffold_3309
Species: Bosea sp. LC85 (90%)
20 15909 bp 67.40 18.35 90.16
SCNpilot_cont_500_bf_scaffold_1802
Species: Bosea sp. LC85 (93.75%)
16 17634 bp 69.42 16.01 90.90
SCNpilot_cont_500_bf_scaffold_5793
Species: Bosea sp. LC85 (68.42%)
19 17915 bp 64.88 17.14 86.97
SCNpilot_cont_500_bf_scaffold_3662
Species: Bosea sp. LC85 (90%)
20 17992 bp 67.51 15.01 89.31
SCNpilot_cont_500_bf_scaffold_1729
Class: Alphaproteobacteria (89.47%)
19 18252 bp 67.93 16.08 95.17
SCNpilot_cont_500_bf_scaffold_2783
Species: Bosea sp. LC85 (62.5%)
24 18455 bp 67.39 19.20 84.51
Displaying items 1-50 of 109 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.